Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 272 a.a., TPR-repeat-containing protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 59.3 bits (142), Expect = 8e-14
 Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 6/164 (3%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           N G+   + G++++ALE ++  L   P    ILL R  +   MG  + A  D+  +L  D
Sbjct: 63  NLGLVQRRLGEYDKALESYSFALNFAPLAVPILLDRAAINLEMGNTDRAYTDYCQVLDED 122

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSR---AFLKDRIGDLEGA 121
           + N + +  RA +  L +    A  + +R L +DP +   YS R   A L+ + G  + A
Sbjct: 123 KQNKEALLMRAYIYVLRRDYPAARIDYNRLLEIDPQS---YSGRLGLATLEQKEGKFKEA 179

Query: 122 IADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKL 165
           +    K I   PEDA  Y  +  VE ++ +++ +    ++A +L
Sbjct: 180 LEILNKMITATPEDATLYIARADVEREMKHEDLALVDLEEAIRL 223



 Score = 46.6 bits (109), Expect = 5e-10
 Identities = 26/86 (30%), Positives = 46/86 (53%)

Query: 12  KEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFI 71
           KEGKF+EALE+ N+++  TP    + + R  V   M   +LAL D +  ++ +  +AD  
Sbjct: 172 KEGKFKEALEILNKMITATPEDATLYIARADVEREMKHEDLALVDLEEAIRLNPSSADAY 231

Query: 72  SDRAVVLHLLKRNEEALSELDRALNL 97
             R  +    K+   A  + ++A++L
Sbjct: 232 LLRGNIYLTQKKKALAKMDFEKAISL 257



 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 3/158 (1%)

Query: 15  KFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDR 74
           K EE L    +L        ++  + G V  R+G+ + ALE +   L         + DR
Sbjct: 39  KAEELLLQALKLEPKNAKNAMLFSNLGLVQRRLGEYDKALESYSFALNFAPLAVPILLDR 98

Query: 75  AVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPE 134
           A +   +   + A ++  + L+ D  N      RA++     D   A  DY + +E+DP+
Sbjct: 99  AAINLEMGNTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRRDYPAARIDYNRLLEIDPQ 158

Query: 135 DAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKE 172
                     +E+K G   + K++ +  +K++   P++
Sbjct: 159 SYSGRLGLATLEQKEG---KFKEALEILNKMITATPED 193