Pairwise Alignments

Query, 410 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 319 a.a., IS110 family transposase from Rhodopseudomonas palustris CGA009

 Score = 63.9 bits (154), Expect = 6e-15
 Identities = 84/337 (24%), Positives = 140/337 (41%), Gaps = 73/337 (21%)

Query: 47  IEELKTWLNSLSITHIAMESTGVYWKPVYNILE-EDFKIILVNARHIK---NVPGH--KT 100
           I E+   L    +  + +E+ G Y +P+   L    F++ +VN R IK      G   KT
Sbjct: 40  IAEIIARLERSGVRRVVLEAIGPYAEPLVRALSVAGFEVGIVNPRRIKAFREAEGGRAKT 99

Query: 101 DKKDSEWIAKLLLSGLLKGSFVPTEWIRELRDLCRYKRKLIAQRVAQRNRLHKILEDANI 160
           D+ D+  IA+  L+       +PT+   EL+ L   +R+L      ++ R+ +       
Sbjct: 100 DRLDARLIARFALTMPETLRPLPTDTQLELKALSLRRRQLTEMIAMEKTRMKQ------- 152

Query: 161 KLASVASDIFGVTGTLIIDALIRKQDDPEYLANLAKGSLRKKMADLKLSLQGRLTEHHRF 220
                      V GTL++D+                                     HR 
Sbjct: 153 -----------VRGTLLLDS-------------------------------------HRA 164

Query: 221 MLATLRDSIDSINAQIGHIEARIERYAVELQQEVDLLQTIPGIGKETAMNILAESGNDME 280
            +A L     +I A++     RI   A EL++ + +L++IPGIG+  A  ++ +     +
Sbjct: 165 AIAALSAQCQAIEAELAK---RIGDDA-ELRRVLHILKSIPGIGERVATLLITDLPELGQ 220

Query: 281 VFPDHKHLASWAGVSPGNNESAGKKKSTRITHGNKYLKTALVEAAWAAS--HTKDTYLGR 338
              D K +AS AG++P  ++S        I  G   ++ AL  AA  A+  H K   L  
Sbjct: 221 --RDRKAIASLAGLAPHVSQSGAAPPRAAIAGGRPCVRAALYMAALVAARHHPK---LRD 275

Query: 339 KYGAIAAR-RGSKKALIAVAHKILTGLYYILKNKEPY 374
            Y A+  + +  K ALIA+A K+L     ++K   PY
Sbjct: 276 DYNALRLQGKPGKVALIAIARKLLVTANALVKADTPY 312