Pairwise Alignments

Query, 410 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 344 a.a., transposase, IS110 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 76/324 (23%), Positives = 142/324 (43%), Gaps = 45/324 (13%)

Query: 60  THIAMES--TGVYWKPVYNILEEDFKIILVNARHIKNV-PGHKTDKKDSEWIAKLLLSGL 116
           T + ME+  +  YW      L    K  L+ AR +K +  G+K D  D+  I +   +G 
Sbjct: 47  TLVVMEACYSANYWGRTIEKLGHTVK--LIPARMVKAMLVGNKNDANDAVAIGET--AGR 102

Query: 117 LKGSFVPTEWI--RELRDLCRYKRKLIAQRVAQRNRLHKILEDANIKLASVASDIFGVTG 174
            K S +  + +  ++++ L R + +L+  R A  N+L   L +  + +A     +     
Sbjct: 103 PKVSLLRPKTVEQQDIQSLLRIRERLVENRTANCNQLRGFLAEYGLIVAKTRRQLM---- 158

Query: 175 TLIIDALIRKQDDPEYLANLAKGSLRKKMADLKLSLQGRLTEHHRFMLATLRDSIDSINA 234
            L I  ++   D+   L+ +A+G ++            RL E   +    L + ID +  
Sbjct: 159 -LAIPLILEDADNE--LSTVARGFIQ------------RLYEFQLY----LNEQIDQVAQ 199

Query: 235 QIGHIEARIERYAVELQQEVDLLQTIPGIGKETAMNILAESGNDMEVFPDHKHLASWAGV 294
            I  +   + +Y         LL TIPG+G   A  +LA S N++  F + + LA+W G+
Sbjct: 200 DILALAQAMPQYP--------LLLTIPGVGPIVASTLLA-SINEVNDFKNGRQLAAWLGL 250

Query: 295 SPGNNESAGKKKSTRIT-HGNKYLKTALVEAAWAASH---TKDTYLGRKYGAIAARRGSK 350
           +P    S    +  +IT  GN+ L+  L+  A    +    KD  L      +  R+   
Sbjct: 251 TPSQYSSGTTNRLGKITKRGNQTLRRLLIHGARTVVNWCDKKDDSLSLWLQRLKQRQHVC 310

Query: 351 KALIAVAHKILTGLYYILKNKEPY 374
           K  +A+A+K+   ++ ++   + +
Sbjct: 311 KVTVALANKMARMVFVVMSRGQAF 334