Pairwise Alignments

Query, 673 a.a., Type IV secretory pathway, VirD4 components from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 681 a.a., putative mobilization protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 1004 bits (2597), Expect = 0.0
 Identities = 502/678 (74%), Positives = 577/678 (85%), Gaps = 5/678 (0%)

Query: 1   MQGEDDLRGLAKIMAFMRAVSILLVLMHLYWFCYGFFSERGWILEIINKILGNFNRTAGL 60
           MQ EDDLR LAKIM F RAVSI L+++H+Y +CY   +     LE+I+KI+ NFN T G+
Sbjct: 1   MQQEDDLRALAKIMEFGRAVSIFLLVVHVYVYCYPSIASWNLNLEVIDKIIMNFNNTTGI 60

Query: 61  FSHPLYTKLFALVLLALSCLGTKGVKNEKITWSKIFVALGIGFVLFFLNTPLLKLSP--V 118
           F+  L++KL A++LLA+SCLGTKGVK EKIT  KI  AL  G +LFF N  +L L     
Sbjct: 61  FNCVLWSKLAAILLLAVSCLGTKGVKGEKITRHKIHAALFAGCILFFPNWWILDLPMPHA 120

Query: 119 AGTSLYILTLAAGYIALLMAGVWMHRLLNNNLMDDVFNSENESFMQETRLMENEYSINLP 178
           A T+LY+ TL  GY+ LLMAG+WM RL  +NLM+DVFN ENESF QETRLMENEYS+NLP
Sbjct: 121 AVTALYVFTLVPGYLCLLMAGLWMSRLYRHNLMEDVFNLENESFQQETRLMENEYSVNLP 180

Query: 179 TKFWYSKKQHNGWINVVNPFRATIVLGTPGSGKSYAIVNNYIKQQIEKGFSLYIYDFKFD 238
           TKF Y  + ++GWINVVNPFRATIVLGTPGSGKSYA+VNNYI+Q I KG+S YIYD+KFD
Sbjct: 181 TKFQYQGRLNDGWINVVNPFRATIVLGTPGSGKSYAVVNNYIRQMISKGYSCYIYDYKFD 240

Query: 239 DLSTIAYNHLLKHSDKYKVKPKFYVINFDDPRRSHRCNPLNPDFMTDISDAYEAAYTIML 298
           DLS IAYN LL + DKYKVKPKFYVINFDDPRRSHRCNP+NP+FMTDISDAYEA+YTIML
Sbjct: 241 DLSIIAYNTLLNNMDKYKVKPKFYVINFDDPRRSHRCNPINPEFMTDISDAYEASYTIML 300

Query: 299 NLNRSWIQKQGDFFVESPIILLAAIIWFLKIYDNGKYCTFPHAIELLNKKYADVFTILTS 358
           NLN++WI+KQGDFFVESPIILLAAIIW+LKIY NG YCTFPHA+ELLNK Y+D+FTILTS
Sbjct: 301 NLNKTWIEKQGDFFVESPIILLAAIIWYLKIYKNGIYCTFPHAVELLNKPYSDLFTILTS 360

Query: 359 YPELENYLSPFMDAWQGGAQDQLQGQIASAKIPLSRMISPQLYWVMTGDDFSLDINNPAA 418
           YPELENYLSPFMDAW+ GAQDQLQGQIASAKIPL+RMISPQLYWVMTG+DFSLDINNP  
Sbjct: 361 YPELENYLSPFMDAWKSGAQDQLQGQIASAKIPLTRMISPQLYWVMTGNDFSLDINNPNE 420

Query: 419 PKILCVGNNPDRQNIYSAALGLYNSRIVKLINKKGQLKSSVIIDELPTIYFRGLDNLIAT 478
           PK+LCVGNNPDRQNIYSAALGLYNSRIVKLINKKGQLKS+VIIDELPTIYFRGLDNLIAT
Sbjct: 421 PKLLCVGNNPDRQNIYSAALGLYNSRIVKLINKKGQLKSTVIIDELPTIYFRGLDNLIAT 480

Query: 479 ARSNKVAVCLGFQDFSQLTRDYGDKESKVIQNTVGNVFSGQVVGETAKNLSERFGKVLQK 538
           ARSNKVAVCLG QDFSQL RDYG+KESKV+QNTVGN+FSGQVVGETA+ LSERFGKVLQK
Sbjct: 481 ARSNKVAVCLGLQDFSQLNRDYGEKESKVVQNTVGNIFSGQVVGETARTLSERFGKVLQK 540

Query: 539 RQSLTINRNDKSTSISTQMDSLIPASKISTLTQGMFVGSVSDNYDERIEQKIFHAEIVVD 598
           RQS++INR D STSI+TQ+DSLIPASKI+ L+QG FVG+VSDN+ E+IEQKIFHAEI+VD
Sbjct: 541 RQSVSINRQDVSTSINTQLDSLIPASKIANLSQGTFVGAVSDNFGEKIEQKIFHAEIIVD 600

Query: 599 NEKVAAETKAYREIPQILSFVDEQGEDKMKEQIENNYRQIKSDILGIVGNELERIKNDPS 658
           +EKV+ E K Y++IP I  F D +G D M +QI  NY +IK+D   I+  E+ERIKNDP 
Sbjct: 601 HEKVSGEEKNYKKIPVINEFRDREGNDIMTQQIGRNYDRIKADAQAIINMEMERIKNDPE 660

Query: 659 LQHLVVKESEN---KNNG 673
           L   +  E+E+   K NG
Sbjct: 661 LCRRLGLENEDDKKKRNG 678