Pairwise Alignments

Query, 237 a.a., hypothetical protein from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 238 a.a., PepSY-associated TM helix (RefSeq) from Shewanella amazonensis SB2B

 Score =  102 bits (254), Expect = 7e-27
 Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 6/215 (2%)

Query: 9   IRKTHRYLGIFIGIQFIGWTVSGLYFSWTDIDEIHGDQFHHEHVTT--HSPRNLISPAQL 66
           +R+ HR L   IGIQ + W++SG Y   TDID+IHGD    E +    H+   L      
Sbjct: 7   VRRWHRLLAPLIGIQVLLWSISGAYMVLTDIDDIHGDHLVAEPLLPIDHAQVRLTFDGVK 66

Query: 67  DSTIGISSLELRYINHQPHYWVNDSLLYNALTGQIKKGITETEAAEI-AQNHLVKNLE-- 123
               G   + L+     P Y+  D  +  A+  +  + +T  + A I A+  LV   +  
Sbjct: 67  ADYPGAMHIRLKQTPQGPVYFFKDGGIARAIDAKTGELLTPPDEASIRARAKLVYTSDDP 126

Query: 124 ILKTEWITETDNHHEYRGRPLPAWAVHFEHPENLTAYVDARNGNFERVRHSRWRWFDFLW 183
           I+K   + E     E   R LP + V F+   + + Y  A  G     R+  WR FDFLW
Sbjct: 127 IVKVS-LYEEQAPAEMSPRLLPLYRVDFDASLSPSLYFSASTGELVGKRYDGWRLFDFLW 185

Query: 184 MFHTMDYAGRDNSNNWLLRAFSVFGLFTVLSGFTL 218
           M H MDY  RDN +N LLR  S+  L   L+G  L
Sbjct: 186 MLHIMDYLERDNIHNNLLRIASLLALLLALTGVLL 220