Pairwise Alignments

Query, 237 a.a., hypothetical protein from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 236 a.a., PepSY-associated TM helix domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (274), Expect = 3e-29
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 6/222 (2%)

Query: 8   YIRKTHRYLGIFIGIQFIGWTVSGLYFSWTDIDEIHGDQFHHE-HVTTHSPRNLISP-AQ 65
           ++RK+H++L +F+G Q + W +SGLY    DID IHGD    E  +T  + +  ISP A 
Sbjct: 9   WLRKSHKWLTLFMGAQLLIWLISGLYMVIMDIDYIHGDHLVDESRLTLDASQLTISPEAI 68

Query: 66  LDSTIGISSLELRYINHQPHYWVN---DSLLYNALTGQIKKGITETEAAEIAQNHLVKNL 122
           L      + LEL      P Y +      L  +   G+  + + + +A  +A      +L
Sbjct: 69  LSRYPEANRLELLPTALGPVYKLRLDGKPLYLSGQDGEPLEPLNQQDAMRLAGLLHPGDL 128

Query: 123 EILKTEWITETDNHHEYRGRPLPAWAVHFEHPENLTAYVDARNGNFERVRHSRWRWFDFL 182
               +E +TE+    E  GR LP W ++     +   Y+ A +G     RH  WR FDF+
Sbjct: 129 SNASSELLTESAPA-EIGGRHLPLWQINLNDAFDSRLYISASSGELVAKRHDFWRLFDFM 187

Query: 183 WMFHTMDYAGRDNSNNWLLRAFSVFGLFTVLSGFTLYAVSSK 224
           WM H MDY  R++ +N LL  FS+  L T LSG  L  ++ K
Sbjct: 188 WMLHIMDYDTREDVHNPLLTGFSLLALLTALSGALLLLIAFK 229