Pairwise Alignments

Query, 443 a.a., Bacteroides conjugative transposon TraM protein from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 432 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  247 bits (630), Expect = 6e-70
 Identities = 144/409 (35%), Positives = 242/409 (59%), Gaps = 22/409 (5%)

Query: 40  LIFVLMGVVFLGCMYLIFKPSSDKKEVENV--GINDAVPQATGAGLPADKGKAYEQEMME 97
           +++  M ++F G ++LI+ PS  ++  E    G N  +P      +  +K  AYE+E +E
Sbjct: 32  IVYPAMCLLFAGSLWLIYSPSEKERAAEEKEKGFNTDIPSPGQQRMDGNKVDAYEREELE 91

Query: 98  RKEQEKRNAMATLSDYWNTNDQE-----KPMEEFPEEDENYSYTGGRSAGRSGNPALSSY 152
           +K++ ++NA   ++  + ++ ++     + M E P E+ +   TG  +  RS   +  +Y
Sbjct: 92  KKDKYRKNAFQEMASLFGSSGKDTVHLPEGMAELPVEEADNPSTGSHNTVRS---SAGAY 148

Query: 153 RYAQNTLESFY-QEDDTETAELRRQLDELKEQLAEKEVPPAVTVDDQLALMEKSYQMAAK 211
           R    TL++FY + +++E  EL R+++EL+ +   K+     T+++++ALMEKSY++AA+
Sbjct: 149 RNMNRTLDNFYTRAENSERNELLRRIEELEHERQMKKPSQETTMEEKMALMEKSYELAAR 208

Query: 212 YLPSGTNAGQAVSADGVAKVAAPTQKVHFVAFTPTRKNTVSALYREPADSTFLADWSESR 271
           Y     N  QA +    +      Q+         R   VS+L +  ++      ++  R
Sbjct: 209 Y-----NGKQATTT---SPAMDKRQRTAVKPVKQVRHQVVSSLSQPASNGESGNGFTGER 260

Query: 272 NRGFFTTGSVGQVVQS-KNSIKACVHETQTITGESGVRLRLLESAQTPDRTIPKGTVLTA 330
           N GF T   VG+V+ S +N+I ACVH TQT++    +R+RLLE     DR IPKGT+LT 
Sbjct: 261 NVGFNTP--VGKVLTSDRNTIPACVHGTQTVSDGQALRIRLLEPMVADDRFIPKGTILTG 318

Query: 331 NAKFQGGRLQLNVSSIELEGNIMPVDIAIYDLDGQQGLHVPYSPEMNALTEMAGNMSQTS 390
            A+ +G RL + V ++E +G ++PV++ +YD DGQ+G+ VP S E +A  E+A NM  + 
Sbjct: 319 GARMEGERLDILVQAVEYKGTVIPVELEVYDADGQRGIPVPNSMEYDAAREIAANMGTSM 378

Query: 391 GTSLMLTQSAGQQMAADLSRGVVQGISGYFSKKVRTPKVTLKAGHQLFL 439
             S+ ++  AG Q+A+DL +GV+QG+SGY +KK+RT KVTLKAGH+L L
Sbjct: 379 NGSINISTDAGAQIASDLGKGVIQGVSGYVAKKMRTVKVTLKAGHRLLL 427