Pairwise Alignments

Query, 477 a.a., Endopolygalacturonase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 538 a.a., exo-alpha-D-galacturonosidase for catabolism of rhamnogalacturonan I and polygalacturonate (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  268 bits (685), Expect = 3e-76
 Identities = 167/493 (33%), Positives = 257/493 (52%), Gaps = 50/493 (10%)

Query: 17  LTLMVSCSKKEQ--SENTIVPSVWDQVPAILESIQKPSFPDQTFVISDFGAVGDGSTDAS 74
           L  +  C + E   SEN I  +++  +P  +  +Q+P FP     IS FGA GDG T  +
Sbjct: 16  LPFVSGCKQSECAISENAIDDTIYQNLPFEMPKVQQPVFPAYEVNISKFGAKGDGMTLNT 75

Query: 75  QAIKSAIQACAEAGGGKVVVPPGDYPTGPIYLESNVNLHLEKDARLMFSTDPKDYLPLVY 134
           +AI  AI+   + GGGKV++P G + TGPI L SNVNL+ E++A ++F+ D + Y P++ 
Sbjct: 76  KAINDAIKEVNQRGGGKVIIPEGTWLTGPIELLSNVNLYTERNALILFTGDFEAY-PIIP 134

Query: 135 TRWEGVELMNYSPLVYAFEEENIAITGEGILDGQANETNWWP----------WKGKTQYG 184
           T +EG+E       + A   ENIAITG GI DG  N   W P          W    + G
Sbjct: 135 TSFEGLETRRCQSPISARNAENIAITGYGIFDG--NGDCWRPVKKEKLTASQWNKLVKSG 192

Query: 185 YTEGDPQQEDADKRHAL--------FQMAEDGVPVEERKFGEGFYLRPQFVQPYRCKNVL 236
               + ++       +L        F + E G+  +E       +LRP  +   + K +L
Sbjct: 193 GVLDEQERIWYPTAGSLKGAMACKDFNVPE-GINTDEEWNEIRAWLRPVLLNFVKSKRIL 251

Query: 237 VEGVKIVNSPMWILNPVLCENVTIEGVTVES--HGPNSDGCDPESSKNVLIKDCYFNTGD 294
           +EGV   NSP W L+P+ CE+ T+  + V +  +  N D  D ES KN LI +  F+ GD
Sbjct: 252 LEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDALDLESCKNALILNSVFDAGD 311

Query: 295 DCIAIKSGRNADGRRINVPSENIIIQNCKMADGHGGVVIGSEISGGVRNVFAENCEMNSP 354
           D I IKSG++ +GRR   P +N+I++N  +  GHGG V+GSE+SGGV+N++ E+C     
Sbjct: 312 DAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEMSGGVKNIYVEDCTFLG- 370

Query: 355 HLDRALRIKTSSMRGGIIEDIYLRNIDVGQIAQQVVRVNMFYEDSGA------------- 401
             D  LR K++  RGG++E+IY+ NI++  I  + +  ++FY   GA             
Sbjct: 371 -TDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGKGAGEESEEDLLSRMK 429

Query: 402 --------YVPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNIKNAEEAYTF 453
                     P  R+IH+ N+     G+  +   G    P+ N+T++NV +  A +    
Sbjct: 430 TAIPPVTEETPAFRDIHISNVICRGSGR-AMFFNGLPEMPIRNVTVKNVVMTEATDGVVI 488

Query: 454 SNVKGVRFKNVTI 466
           S V GV  +N+ +
Sbjct: 489 SQVDGVTLENIYV 501