Pairwise Alignments
Query, 815 a.a., Leucine Rich Repeat. from Echinicola vietnamensis KMM 6221, DSM 17526
Subject, 1085 a.a., Leucine-rich repeat (NCBI) from Rhodospirillum rubrum S1H
Score = 119 bits (299), Expect = 7e-31
Identities = 87/318 (27%), Positives = 165/318 (51%), Gaps = 32/318 (10%)
Query: 486 VEEISRIVGMDSLD---LSGSEIINLRPVIKFKKLISLKFDDTKIHELSPVRELQTLKQL 542
V +++ + G+++L LS + + +L P+ K L SL +T++ +L+P+ L+ L+ +
Sbjct: 84 VTDLTPLTGLENLQGLFLSYTAVTDLTPLTGIKSLQSLILSETQVTDLTPLAGLKNLQSI 143
Query: 543 SANFTPITNVEDIGKVNGLERISLKETLISSIEPLQKLYRLEFLDIDHTDVPKWEVQTVL 602
+ + T IT++ + + L+ ++L T ++ + PL L L+ L + T V+
Sbjct: 144 NLSATQITDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQHLILLGT--------RVI 195
Query: 603 QVVPDANIIFRSDELKGWWNSLDGVWQSIFVEQFNISTEPNSRELHKLTSNRVLKIQRKS 662
+ P A + SL QS+ + ++ N L L S + L ++R
Sbjct: 196 DLTPLAGL-----------KSL----QSLDLSGTRVT---NIAPLVGLKSLQSLDLRRTR 237
Query: 663 IQNLRPLVDFINLQTLQIYDV---PLHDISDLASFELIKNLSITQAPITTVEPLAGLKTL 719
+ ++ PLV +L++LQ ++ P+ D++ LA E ++NL+++ +T + PLAGL+ L
Sbjct: 238 VTDIAPLVGLKSLKSLQSLNLSRTPVTDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENL 297
Query: 720 EHLNLSNTGIEDLRPLEGLTDLETLILSGTSVRRLRGLDTLHKLEELDIASTDVRSIRDI 779
++++L T + DL PL GL +L+ + L GT V L L L L+ L ++ T V + +
Sbjct: 298 QNIDLGGTEVIDLAPLAGLENLQNIDLGGTEVIDLAPLAGLENLQNLTLSYTTVTDLAPL 357
Query: 780 EDLRGLKKLSCFNTRINS 797
L L+ + C RI S
Sbjct: 358 AGLENLQSIDCSGCRITS 375
Score = 112 bits (281), Expect = 9e-29
Identities = 79/290 (27%), Positives = 143/290 (49%), Gaps = 23/290 (7%)
Query: 489 ISRIVGMDSLDLSGSEIINLRPVIKFKKLISLKFDDTKIHELSPVRELQTLKQLSANFTP 548
++ I + SL LS +++ +L P+ K L S+ T+I +L+P+ L+ L+ L+ ++T
Sbjct: 112 LTGIKSLQSLILSETQVTDLTPLAGLKNLQSINLSATQITDLAPLAGLENLQNLTLSYTT 171
Query: 549 ITNVEDIGKVNGLERISLKETLISSIEPLQKLYRLEFLDIDHTDVPKWEVQTVLQVVPDA 608
+T++ + + L+ + L T + + PL L L+ LD+ T V + P
Sbjct: 172 VTDLAPLAGLENLQHLILLGTRVIDLTPLAGLKSLQSLDLSGT--------RVTNIAPLV 223
Query: 609 NIIFRSDELKGWWNSLDGVWQSIFVEQFNISTEPNSRELHKLTSNRVLKIQRKSIQNLRP 668
+ SL QS+ + + ++ L L S + L + R + +L P
Sbjct: 224 GL-----------KSL----QSLDLRRTRVTDIAPLVGLKSLKSLQSLNLSRTPVTDLAP 268
Query: 669 LVDFINLQTLQIYDVPLHDISDLASFELIKNLSITQAPITTVEPLAGLKTLEHLNLSNTG 728
L NLQ L + + D++ LA E ++N+ + + + PLAGL+ L++++L T
Sbjct: 269 LAGLENLQNLTLSYTTVTDLAPLAGLENLQNIDLGGTEVIDLAPLAGLENLQNIDLGGTE 328
Query: 729 IEDLRPLEGLTDLETLILSGTSVRRLRGLDTLHKLEELDIASTDVRSIRD 778
+ DL PL GL +L+ L LS T+V L L L L+ +D + + S+ D
Sbjct: 329 VIDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQSIDCSGCRITSVPD 378
Score = 111 bits (277), Expect = 2e-28
Identities = 81/344 (23%), Positives = 162/344 (47%), Gaps = 53/344 (15%)
Query: 234 LIQDLSPLESLRDLKYIDISNTMIQELGPISNVTYLAYLDVSNTPTADIQFVKYSDNLEY 293
L+ DL+PL L +L+ + +S T + +L P++ + L L +S T D+ + NL+
Sbjct: 83 LVTDLTPLTGLENLQGLFLSYTAVTDLTPLTGIKSLQSLILSETQVTDLTPLAGLKNLQS 142
Query: 294 LNISNTLIENIDDLTSLTNLKVLVAENTPLMSFAGLNSFSGLEELNMEKSGLNNVENIHQ 353
+N+S T I ++ L L NL+ L T + A L L+ L + + + ++ +
Sbjct: 143 INLSATQITDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQHLILLGTRVIDLTPLAG 202
Query: 354 LTNLKRLNISGNYLINFEFLADLKNLEEINLSRTNVGSLEP---LKDLEHLEVVKINETT 410
L +L+ L++SG + N L LK+L+ ++L RT V + P LK L+ L+ + ++ T
Sbjct: 203 LKSLQSLDLSGTRVTNIAPLVGLKSLQSLDLRRTRVTDIAPLVGLKSLKSLQSLNLSRTP 262
Query: 411 VNSLEPLDQKDGLATVYADRTEIAEEQANAFAVSNRRVLLIHNVENLQTWWTTLPEGWEA 470
V L PL + N++NL +TT+ +
Sbjct: 263 VTDLAPLAG-------------------------------LENLQNLTLSYTTVTD---- 287
Query: 471 VLRKYIPGNRSRMPSVEEISRIVGMDSLDLSGSEIINLRPVIKFKKLISLKFDDTKIHEL 530
+ ++ + + ++DL G+E+I+L P+ + L ++ T++ +L
Sbjct: 288 ---------------LAPLAGLENLQNIDLGGTEVIDLAPLAGLENLQNIDLGGTEVIDL 332
Query: 531 SPVRELQTLKQLSANFTPITNVEDIGKVNGLERISLKETLISSI 574
+P+ L+ L+ L+ ++T +T++ + + L+ I I+S+
Sbjct: 333 APLAGLENLQNLTLSYTTVTDLAPLAGLENLQSIDCSGCRITSV 376
Score = 89.0 bits (219), Expect = 1e-21
Identities = 71/302 (23%), Positives = 141/302 (46%), Gaps = 23/302 (7%)
Query: 296 ISNTLIENIDDLTSLTNLKVLVAENTPLMSFAGLNSFSGLEELNMEKSGLNNVENIHQLT 355
IS L+ ++ LT L NL+ L T + L L+ L + ++ + ++ + L
Sbjct: 79 ISARLVTDLTPLTGLENLQGLFLSYTAVTDLTPLTGIKSLQSLILSETQVTDLTPLAGLK 138
Query: 356 NLKRLNISGNYLINFEFLADLKNLEEINLSRTNVGSLEPLKDLEHLEVVKINETTVNSLE 415
NL+ +N+S + + LA L+NL+ + LS T V L PL LE+L+ + + T V L
Sbjct: 139 NLQSINLSATQITDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQHLILLGTRVIDLT 198
Query: 416 PLDQKDGLATVYADRTEIAE-------EQANAFAVSNRRVLLIHNVENLQTWWTTLPEGW 468
PL L ++ T + + + + RV I + L++
Sbjct: 199 PLAGLKSLQSLDLSGTRVTNIAPLVGLKSLQSLDLRRTRVTDIAPLVGLKS--------- 249
Query: 469 EAVLRKYIPGNRSRMPSVEEISRIVGMDSLD---LSGSEIINLRPVIKFKKLISLKFDDT 525
L+ N SR P V +++ + G+++L LS + + +L P+ + L ++ T
Sbjct: 250 ---LKSLQSLNLSRTP-VTDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQNIDLGGT 305
Query: 526 KIHELSPVRELQTLKQLSANFTPITNVEDIGKVNGLERISLKETLISSIEPLQKLYRLEF 585
++ +L+P+ L+ L+ + T + ++ + + L+ ++L T ++ + PL L L+
Sbjct: 306 EVIDLAPLAGLENLQNIDLGGTEVIDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQS 365
Query: 586 LD 587
+D
Sbjct: 366 ID 367
Score = 58.9 bits (141), Expect = 1e-12
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 691 LASFELIKNLSITQAPITTVEPLAGLKTLEHLNLSNTGIEDLRPLEGLTDLETLILSGTS 750
L ++ + I+ +T + PL GL+ L+ L LS T + DL PL G+ L++LILS T
Sbjct: 68 LTCWDRARGSFISARLVTDLTPLTGLENLQGLFLSYTAVTDLTPLTGIKSLQSLILSETQ 127
Query: 751 VRRLRGLDTLHKLEELDIASTDVRSIRDIEDLRGLKKLSCFNTRI 795
V L L L L+ +++++T + + + L L+ L+ T +
Sbjct: 128 VTDLTPLAGLKNLQSINLSATQITDLAPLAGLENLQNLTLSYTTV 172
Score = 46.2 bits (108), Expect = 1e-08
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 224 MDSLDLSGNSLIQDLSPLESLRDLKYIDISNTMIQELGPISNVTYLAYLDVSNTPTADIQ 283
+ ++DL G +I DL+PL L +L+ ID+ T + +L P++ + L L +S T D+
Sbjct: 297 LQNIDLGGTEVI-DLAPLAGLENLQNIDLGGTEVIDLAPLAGLENLQNLTLSYTTVTDLA 355
Query: 284 FVKYSDNLEYLNISNTLIENIDD 306
+ +NL+ ++ S I ++ D
Sbjct: 356 PLAGLENLQSIDCSGCRITSVPD 378