Pairwise Alignments

Query, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 811 a.a., DNA gyrase subunit B from Sinorhizobium meliloti 1021

 Score =  592 bits (1526), Expect = e-173
 Identities = 308/566 (54%), Positives = 399/566 (70%), Gaps = 10/566 (1%)

Query: 1   MSKEQASNLGEYSAGNIQILEGLEAVRKRPAMYIGDVGV-KGLHHLIWEVVDNSIDEALA 59
           +S+ +A  + EY A +I++L+GL+AVRKRP MYIGD     GLHH+++EVVDN+IDEALA
Sbjct: 4   ISETEAGAIAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALA 63

Query: 60  GHCDTIHVTVLEDNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSG 119
           GH D + VT+  D SV V DNGRGIPTD+H +E  SA EV+MT LHAGGKFD+++YKVSG
Sbjct: 64  GHADIVTVTLNPDGSVTVTDNGRGIPTDIHREEGVSAAEVIMTQLHAGGKFDQNSYKVSG 123

Query: 120 GLHGVGVSCVNALSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGETE-KRGTIIHFVPD 178
           GLHGVGVS VNALS  LK  + R GK+ E  ++ GV    +   G+   + GT + F P 
Sbjct: 124 GLHGVGVSVVNALSVSLKLKIRRAGKIHEMSFTHGVADGPLKVTGDAGGETGTEVTFTPS 183

Query: 179 GDIFTVTEYKYETIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVE 238
              F+  E+++ T+ +RLRE+AFLN+GVRI   D R  D     + +E   +GGL  FV 
Sbjct: 184 EQTFSNIEFEFGTLEHRLRELAFLNSGVRIVLTDKRHSDI----RREEMMYDGGLEAFVA 239

Query: 239 YLDETREKIIQEPIYIESEKNAVPVQVAMSYNSSFSENVVSYVNTINTYEGGTHVSGFRR 298
           YLD  ++ ++Q+P+ I  EK+ + V+VAM +N S+ ENV+ + N I   +GGTH++GFR 
Sbjct: 240 YLDRAKKPLVQKPVSIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRG 299

Query: 299 ALTRTLKGYADKSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVS 358
           ALTR +  YAD SG+  K K  ++GDD REGLTAV+SVKV +P+F  QTK KL +SEV  
Sbjct: 300 ALTRQITSYADTSGITKKEKVSLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRP 359

Query: 359 AVDSAVSEVLQYWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKL 418
            V+S V+E L  WLEEHP +AKI+VGKVV AA AR AARKARE+ +RK  L    LPGKL
Sbjct: 360 VVESLVNEALSVWLEEHPSDAKILVGKVVEAAAAREAARKARELTRRKGALDISSLPGKL 419

Query: 419 ADCANTNPEVCELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEI 478
           ADC+  +P   EL+LVEGDSAGGSAKQGR R+ QAILPL+GKILNVE+A   K+  + EI
Sbjct: 420 ADCSERDPAKSELFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEI 479

Query: 479 KNILTALGVKFGTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIE 538
             ++TALG   G    + E +   LRYHKI+IMTDAD+DG+HIRTL+LT FFR M  LIE
Sbjct: 480 GTLITALGTSIG----KDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIE 535

Query: 539 NGYVYIALPPLYLLKKGKDERYCWSE 564
            G++YIA PPLY + +GK  +Y   E
Sbjct: 536 RGHLYIAQPPLYKVARGKSVQYLKDE 561



 Score = 88.2 bits (217), Expect = 1e-21
 Identities = 41/61 (67%), Positives = 49/61 (80%)

Query: 585 IQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIEKN 644
           +QRYKGLGEMN EQLW TT+DP  R+L QV +  A +AD LFS LMGDEV PRR+FI++N
Sbjct: 743 MQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVTDATDADGLFSRLMGDEVEPRRDFIQEN 802

Query: 645 A 645
           A
Sbjct: 803 A 803