Pairwise Alignments

Query, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 802 a.a., DNA gyrase, B subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  560 bits (1443), Expect = e-164
 Identities = 290/557 (52%), Positives = 387/557 (69%), Gaps = 10/557 (1%)

Query: 12  YSAGNIQILEGLEAVRKRPAMYIGDVGV-KGLHHLIWEVVDNSIDEALAGHCDTIHVTVL 70
           Y++ +I++L+GLEAVRKRP MYIGD     GLHH+++EVVDN+IDEALAG+CD   V + 
Sbjct: 6   YTSESIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGYCDHSEVILN 65

Query: 71  EDNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVSCVN 130
            D SV V DNGRGIP D+H +E  SA EV+MT LHAGGKFD+++YKVSGGLHGVGVS VN
Sbjct: 66  GDGSVTVCDNGRGIPVDIHREEGVSAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVN 125

Query: 131 ALSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGET-EKRGTIIHFVPDGDIFTVTEYKY 189
           ALS  L   ++R+GK     +  G     +  +G+  ++ GT I F+    IF +T Y Y
Sbjct: 126 ALSDWLDLRIWRDGKEHYVRFEHGEVVAPLKVVGDCGDRTGTEITFLASPAIFAITTYDY 185

Query: 190 ETIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVEYLDETREKIIQ 249
            T+ +RLRE+AFLN+GVR+   D R  +    P++ +F  +GG+ EFV YLD+++  +  
Sbjct: 186 ATLEHRLRELAFLNSGVRLLLTDKRGTE----PRTTKFHYDGGIEEFVRYLDKSKTVLHS 241

Query: 250 EPIYIESEKNAVPVQVAMSYNSSFSENVVSYVNTINTYEGGTHVSGFRRALTRTLKGYAD 309
            P+    E++ + V++++ +  S+ E V+ + N I   +GGTH++GFR  LTRTL  YA 
Sbjct: 242 PPVTAIGERDGMIVELSLEWTDSYHETVLCFTNNIPQRDGGTHMAGFRGGLTRTLNSYAQ 301

Query: 310 KSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVLQ 369
            SG++ K K  ++GDD REGLT V+SVKV +P+F  QTK KL +SEV   V++ V E L 
Sbjct: 302 DSGLMKKEKVTLTGDDMREGLTCVLSVKVPDPKFSSQTKEKLVSSEVRPVVEAVVVERLG 361

Query: 370 YWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEVC 429
            WLEEHP+EA+ I+GKVV AA AR AAR+ARE+ +RK  L    LPGKLADC N +P   
Sbjct: 362 QWLEEHPQEARKIIGKVVEAAAAREAARRARELTRRKGALDMASLPGKLADCQNRDPAQS 421

Query: 430 ELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVKF 489
           EL++VEGDSAGGSAKQGRDR +QAILPL+GKILNVE+A   K+  + EI  ++ ALG   
Sbjct: 422 ELFIVEGDSAGGSAKQGRDRGYQAILPLRGKILNVERARFDKMLSSAEIGTLIAALGTGI 481

Query: 490 GTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPPL 549
           G    + + D+   RYHKI+IMTDAD+DGSHIRTL+LT FFR M  ++E GY+YIA PPL
Sbjct: 482 G----KDDFDVGKARYHKIIIMTDADVDGSHIRTLLLTFFFRQMPEVVEKGYLYIAQPPL 537

Query: 550 YLLKKGKDERYCWSEDE 566
           Y  K+G  E+Y   + E
Sbjct: 538 YRAKRGNSEQYLKDDRE 554



 Score = 85.9 bits (211), Expect = 7e-21
 Identities = 39/63 (61%), Positives = 48/63 (76%)

Query: 583 VGIQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIE 642
           + IQRYKGLGEMNPEQLW TT+DP  R L QV +   ++A+ +FS LMGD V PRR+FI+
Sbjct: 732 IAIQRYKGLGEMNPEQLWETTLDPNVRRLLQVKVNQVSDAEDVFSTLMGDIVEPRRDFIQ 791

Query: 643 KNA 645
            NA
Sbjct: 792 DNA 794