Pairwise Alignments

Query, 350 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 169 a.a., RNA polymerase sigma factor from Cupriavidus basilensis FW507-4G11

 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 80  LGAAMEAEDVVQDVFEKFLTL-DTNTIQNEKAYLIRMV--INQAINRKKQLNRSLLHYPN 136
           LG A  A D+ QD F + L   D ++++  +AYL  +   +     R+  L R+ L    
Sbjct: 31  LGNADNAADLAQDTFARLLVACDASSLREPRAYLTTVASRLTAQYFRRLALERAYLE-AL 89

Query: 137 DWLPEPVITNMDTERLEDEHILSYSMMLLLEQLEPGPRAVFLLKESFGYSHKAISQTLDI 196
              PE    + +T  L  E + + S +L  EQL P     FLL +  G ++K I+Q L +
Sbjct: 90  ALQPEAAAPSPETRALVVEALTAVSTVL--EQLPPRVCEAFLLSQLDGLAYKDIAQRLGV 147

Query: 197 SQETSRQQLSRA 208
           +    ++ +S+A
Sbjct: 148 TVNVVQKWMSKA 159