Pairwise Alignments

Query, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 104/407 (25%), Positives = 169/407 (41%), Gaps = 93/407 (22%)

Query: 19  VLILFIIIGRALG-----------WVGGAAETEVETTKASKKTI--VEKVSASGVIEPET 65
           +LI  ++ G  +G           ++    E E   T  +   +  V  + A G IEP  
Sbjct: 9   LLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEAIGFIEPNQ 68

Query: 66  EVKLSPDVAGEIIELNISEGDSVKQNDLLVKIRPDNFISALDRTRANLNQQKANLAQSQA 125
            V L+ + AG I ++    G  V ++  LV +      SA++R                A
Sbjct: 69  GVTLTTETAGVIDQITFESGTQVAKDQPLVLLD-----SAVER----------------A 107

Query: 126 ALKRSEALFDRAKLQYERNKSLYESNVISDSEFEQATADYVSAENDLKAAQQSVEAAEYV 185
            LK +EA    AK +YER K L+    IS   +++A A Y +   D+++ + ++   E  
Sbjct: 108 NLKSTEARLPAAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARRE-- 165

Query: 186 VKSSQASVEEANENLRLTNVFAPTDGIVSKLLVEKGERVVGTQQMAGTEMLRIADLSVME 245
           +K+  A V      + + NVF                  +G     GT+++R+ D SVM 
Sbjct: 166 IKAPFAGV------IGIRNVF------------------LGQYLQPGTDIVRLEDTSVMR 201

Query: 246 VVVDVNENDIVRISLGDTTIIEVDAYSHTGEKFTGVVTSIANSANEKATQDAVTEFEVEI 305
           +   V + DI RISL     I VDAY  T   F G +++I  +    + Q  + + + +I
Sbjct: 202 LRFTVPQRDISRISLDQEVDIFVDAYPQT--SFKGSISAIEPAV---SVQSGLIQVQADI 256

Query: 306 RILNESYEKLITKENRYPFRPGMTASVEIITEKKADVLSVPLAAVTTR---DDIR-VDST 361
                S  KL         R GM A   II  K  + +++P  A+T     D++  V   
Sbjct: 257 ---PNSDGKL---------RSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEE 304

Query: 362 NAESDLQEIIFMSEGNKAHLTRVKTGISDFENIEILEGIKEGEELVS 408
           N E  +Q+ +            VK G        ILEG+K G+ +V+
Sbjct: 305 NGEKRVQQHV------------VKVGERSESIAHILEGVKPGDVVVT 339