Pairwise Alignments

Query, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 355 a.a., efflux transporter periplasmic adaptor subunit from Pedobacter sp. GW460-11-11-14-LB5

 Score = 94.0 bits (232), Expect = 7e-24
 Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 73/374 (19%)

Query: 35  GAAETEVETTKASKKTIVEKVSASGVIEPETEVKLSPDVAGEIIELNISEGDSVKQNDLL 94
           G     V   +  +K +    SA+G   P+ E+    + AG +  + + EGD V +  +L
Sbjct: 39  GGGAVAVRVAQVERKAVNLDFSANGNFIPKQELNFLSENAGRVTAIYVDEGDRVSKGQVL 98

Query: 95  VKIRPDNFISALDRTRANLNQQKANLAQSQAALKRSEALFDRAKLQYERNKSLYESNVIS 154
            ++  D  I   DR  A  N Q A                        R+++ Y+S+  +
Sbjct: 99  ARV--DAEIINTDRETAEANYQNA-----------------------VRDEARYQSSFST 133

Query: 155 DSEFEQATADYVSAENDLKAAQQSVEAAEYVVKSSQASVEEANENLRLTNVFAPTDGIVS 214
                                QQ ++ A+   ++++  ++ +   L   N+ +P +GIV+
Sbjct: 134 GG-----------------VTQQQLDQAKLATRNAKLRLQASQRRLSDANIKSPINGIVN 176

Query: 215 KLLVEKGERVVGTQQMAGTEMLRIADLSVMEVVVDVNENDIVRISLGDTTIIEVDAYSHT 274
           K  +E G   V TQ   GT++  + D+S +++ V+VNE+ +  + +GD   I++ +    
Sbjct: 177 KRYIEVG-AFVNTQ---GTQLFELVDVSKLKLKVNVNESQVANLKIGDQ--IDIKSSVFP 230

Query: 275 GEKFTGVVTSIANSANEKATQDAVTEFEVEIRILNESYEKLITKENRYPFRPGMTASVEI 334
            + F+G VT IA      A  DA   F +EI + N     L         + GM  +   
Sbjct: 231 TDNFSGKVTFIA------AKADATLNFPIEIEVENSQKNTL---------KAGMYGTAIF 275

Query: 335 ITEKKADVLSVPLAAVTTRDDIRVDSTNAESDLQEIIFMSEGNKAHLTRVKTGISDFENI 394
              K+A  + +P          R     + S  Q  +     N +    V  G    +N+
Sbjct: 276 KFPKQAPSILIP----------RTSFVGSVSSNQVFVLDKANNTSKTRNVVAGRILGDNV 325

Query: 395 EILEGIKEGEELVS 408
           EIL+G+KEGE +++
Sbjct: 326 EILDGLKEGETVIT 339