Pairwise Alignments

Query, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 446 a.a., efflux transporter periplasmic adaptor subunit from Pedobacter sp. GW460-11-11-14-LB5

 Score =  315 bits (808), Expect = 1e-90
 Identities = 188/443 (42%), Positives = 279/443 (62%), Gaps = 31/443 (6%)

Query: 8   KLIYILGGVAGVLILFIIIGRALGWVGGAAETEVETTKASKKTIVEKVSASGVIEPETEV 67
           KL +I+  V  ++ L +I+  A G +GG    +V T KAS KT+VE V+ASG I+PETEV
Sbjct: 2   KLKHIIITVVAIVALLVILKLA-GVIGGDKTEKVTTEKASDKTVVETVTASGKIQPETEV 60

Query: 68  KLSPDVAGEIIELNISEGDSVKQNDLLVKIRPDNFISALDRTRANLNQQKANLAQSQAAL 127
           KLS +V+GE++EL + EGD VK   LL K+RPD   S  +RT A+ N QKA++A +Q  L
Sbjct: 61  KLSSEVSGEVVELKVKEGDIVKAGQLLCKVRPDVLQSGYERTVASFNAQKASVASAQQQL 120

Query: 128 KRSEALFDRAKLQYERNKSLYESNVISDSEFEQATADYVSAENDLKAAQQSVEAAEYVVK 187
            +++A F  A   Y+RN  L+   VIS SEF+ A A Y++A+ +L +A++SV  A++ ++
Sbjct: 121 VQNQANFVNADATYKRNVELFNKKVISASEFDAAKAAYLTAKANLASAKESVIGAKFTLE 180

Query: 188 SSQASVEEANENLRLTNVFAPTDGIVSKLLVEKGERVVGTQQMAGTEMLRIADLSVMEVV 247
            + A+V+EA  NL  T ++AP DG+VSKL +E G+R++GT QMAGTE++RI++LS MEV 
Sbjct: 181 QTGANVKEAGANLAKTTIYAPVDGVVSKLSIELGDRILGTSQMAGTEIMRISNLSSMEVN 240

Query: 248 VDVNENDIVRISLGDTTIIEVDAYSHTGEKFTGVVTSIANSANEKATQ-----DAVTEFE 302
           VDVNENDI R+ +GD   IEVDA+S   +KF G VT IA+S+    T      D VT F 
Sbjct: 241 VDVNENDITRVKVGDKASIEVDAFS--DKKFRGEVTEIASSSTAVGTAVSTSVDQVTNFS 298

Query: 303 VEIRILNESYEKLITKENRYPFRPGMTASVEIITEKKADVLSVPLAAVTTRDDIRVDST- 361
           V+IRI  E     +  + +  FRPGM+A+V+I +E     L++P+ AV T +    D++ 
Sbjct: 299 VKIRITEE-----LAGKQQSIFRPGMSATVDIESESLTG-LAIPIQAVFTDNAKSADASQ 352

Query: 362 ----NAESDLQE------------IIFMSEGNKAHLTRVKTGISDFENIEILEGIKEGEE 405
                A +D Q+              + ++  K   T V TGI + + I +  G+K GEE
Sbjct: 353 NQGNQANTDKQKSKLTDKKVKQYIYAYDAKTKKVKKTEVTTGIQNDQFIIVKSGVKTGEE 412

Query: 406 LVSGPYFVVSKQLEDGDLIKKTN 428
           +V+GPY  +  +L+DG +++KT+
Sbjct: 413 IVTGPYSAIQNKLKDGMIVEKTS 435