Pairwise Alignments

Query, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 396 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score =  118 bits (295), Expect = 4e-31
 Identities = 96/369 (26%), Positives = 167/369 (45%), Gaps = 40/369 (10%)

Query: 40  EVETTKASKKTIVEKVSASGVIEPETEVKLSPDVAGEIIELNISEGDSVKQNDLLVKIRP 99
           ++ET    +  + + V+A+G +  +  V +   VAG+I ++++  G++VK   LL  + P
Sbjct: 62  KLETVTVERADLEQVVNATGNVVAQDYVDVGSKVAGQISDVDVVVGETVKAGKLLATVAP 121

Query: 100 DNFISALDRTRANLNQQKANLAQSQAALKRSEALFDRAKLQYERNKSLYESNVISDSEFE 159
               S ++  RA L + KA LA   A L       D A+LQ++R   L   N   +  +E
Sbjct: 122 AVQSSRIENNRATLARLKAELAGQNAQL-------DFAQLQFQRQTQLKAENATREESYE 174

Query: 160 QATADYVSAENDLKAAQQSVEAAEYVVKSSQASVEEANENLRLTNVFAPTDGIVSKLLVE 219
                  S+  ++ AA   V+A    ++ ++A++ E     + T + AP  G +  L   
Sbjct: 175 -------SSRMNMYAAAARVDATNAQIQQTEAAIREDEAVQKQTRIEAPVSGTIVTLNAR 227

Query: 220 KGERVVGTQQMAGTEMLRIADLSVMEVVVDVNENDIVRISLGDTTIIEVDAYSHTGEKFT 279
            G+ V   Q+     ++RIADLS M V V V E D+ R+  G T       Y   G++++
Sbjct: 228 PGQMVAANQE----ALMRIADLSRMTVQVPVAEEDVTRLQKGMTAYFTTPGY--PGKRWS 281

Query: 280 GVVTSI-ANSANEKATQDAVTEFEVEIRILNESYEKLITKENRYPFRPGMTASVEIITEK 338
           G +  I     ++   Q     + V   + N S E +           GM+A V  +  +
Sbjct: 282 GKLRQIMLLPTDDSGRQGKKAFYTVFFDVANPSRELM----------SGMSADVYFVLAR 331

Query: 339 KADVLSVPLAAVTTRDDIRVDSTNAESDLQEIIFMSEGNKAHLTRVKTGISDFENIEILE 398
              V ++P   VT      +D T      Q +  +    K    ++K GI D E  ++L 
Sbjct: 332 AEHVPTIPRTLVTKPG---MDGT------QTVKVVLADGKLETRKIKIGIRDNERAQVLS 382

Query: 399 GIKEGEELV 407
           G+KEGE+++
Sbjct: 383 GLKEGEQVL 391