Pairwise Alignments

Query, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 405 a.a., hemolysin secretion protein D from Herbaspirillum seropedicae SmR1

 Score =  103 bits (257), Expect = 1e-26
 Identities = 92/381 (24%), Positives = 160/381 (41%), Gaps = 38/381 (9%)

Query: 51  IVEKVSASGVIEPETEVKLSPDVAGEIIELNISEGDSVKQNDLLVKIRPDNFISALDRTR 110
           I + V ASG ++   +V +   V+G+I  L ++ GD VK+  L+ +I           T+
Sbjct: 48  IQDVVLASGTVKAYKQVSVGAQVSGQIKSLKVALGDQVKKGQLVAEID--------SLTQ 99

Query: 111 AN-LNQQKANLAQSQAALKRSEALFDRAKLQYERNKSLYESNVISDSEFEQATADYVSAE 169
           AN L   + +L   QA L+  EA   +A+L Y R K +   +  S   FE       SAE
Sbjct: 100 ANALASAEFSLQNLQAQLRAKEASLKQAQLAYARQKMMLAGDASSRENFE-------SAE 152

Query: 170 NDLKAAQQSVEAAEYVVKSSQASVEEANENLRLTNVFAPTDGIVSKLLVEKGERVVGTQQ 229
             L   Q  + A +  +K     V+ A  NL  T + +P +G V  ++ ++G+ V   Q 
Sbjct: 153 ATLNTTQADIAALQAQIKDGAIKVDTARLNLGYTRISSPIEGQVVAIVAQEGQTVNANQ- 211

Query: 230 MAGTEMLRIADLSVMEVVVDVNENDIVRISLGDTTIIEV-----DAYSHTGEKFTGVVTS 284
            +   ++++A +  + +   ++E D+VR+  G      +       Y  T         S
Sbjct: 212 -STPTIIKVARMDTVTIKAQISEADVVRVKPGQPVFFTILGDPDHRYRTTLRAIEPAPDS 270

Query: 285 IANSANEKATQDAVTEFEVEIRILNESYEKLITKEN-RYPFRPGMTASVEIITEKKADVL 343
           I       +T    +        +   Y  L+   N     R  MT  V I+  + ++ L
Sbjct: 271 ILQDDTSSSTTSITSSSSASSTAI--YYNGLLDVPNPDGKLRISMTTQVNIVLSEASNAL 328

Query: 344 SVPLAAVTTRDDIRVDSTNAESDLQEIIFMSEGNKAHLTRVKTGISDFENIEILEGIKEG 403
            +P  A+            A      +  + +  +AH  +V+ GI+    ++I+EG+K G
Sbjct: 329 VLPSTAL---------GAKAADGSYTVRVLDDQGQAHERKVRIGINTNALVQIVEGVKAG 379

Query: 404 EELVSG---PYFVVSKQLEDG 421
           E +V+G   P    S    DG
Sbjct: 380 ERVVTGTVLPGAAASSSAHDG 400