Pairwise Alignments

Query, 913 a.a., ABC-type sugar transport system, periplasmic component from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 856 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  130 bits (326), Expect = 5e-34
 Identities = 105/359 (29%), Positives = 167/359 (46%), Gaps = 40/359 (11%)

Query: 397 QQKFDFFTNISHEFRTPLTLIQAPVEDLLAN---KDAAPFKPDLQLIRKNTMRLLRLVNQ 453
           Q K DF + +SHE RTPLT I   +  ++        A  +  L++  +N++RL  L+N 
Sbjct: 493 QMKNDFVSTVSHELRTPLTSISGALGLIVGGALGSAPASMQQMLEIAYRNSLRLGHLIND 552

Query: 454 LMDLRKIDHAKMKVKAVEQELIPFLQDILNSFDKTAQKHDITLRLLADNRNLKVWYDPMM 513
           L+D+ KI   KM  +  E  L   L++ L S     ++H I    L    ++ VW D M 
Sbjct: 553 LLDMEKIAAGKMSFELREHSLGDLLEESLASNQALCEQHGIRCS-LDHPVDVLVWVDGMR 611

Query: 514 LDKVMFNLLSNAFKFTPIHGSVIVKVTEKPLSNKVCIRVEDTGSGMSPEDTSHVFDRFYQ 573
           L +V+ N LSNA KFTP  G   +++       +V I V D G G+     S VF++F Q
Sbjct: 612 LQQVLGNFLSNAVKFTPQGGE--IRLHSSLRGPRVRISVTDQGPGIPEAFRSRVFEKFAQ 669

Query: 574 GETYSA---AGSGIGLALSKELIELHHGEICLESTLGKGTSFEVVLQMGKAHFNESEMLN 630
            +   +   +G+G+GLA++KELIE   G +  +   G+GT+F   L +            
Sbjct: 670 ADASDSRQKSGTGLGLAITKELIERMGGTVGFDCPPGQGTTFWCELPI------------ 717

Query: 631 GTATQYFSEENIGILEEVTPKISRDTQEEKEQTLLIIEDDQQIRQYLCQQL-SAHYNILE 689
               Q  SE +           SRD        +L++ED+    + L   L    Y +  
Sbjct: 718 ---QQLASETD-----------SRDDLPR----ILVVEDEPDTGRLLHMMLREGGYGVER 759

Query: 690 AENFEVGIAKALDKLPDLITCDLMLKQGSGFDIIKKLKDDIRTSHIPIIVITAKSSLDE 748
            ++      K      + +T DL L  GSG  +I +L++     ++PI+VI+A    D+
Sbjct: 760 VQSLHQAREKLAAGRYEAMTLDLHLPDGSGMQLIDELREKPAMQNLPIVVISAAHQFDQ 818