Pairwise Alignments

Query, 913 a.a., ABC-type sugar transport system, periplasmic component from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 910 a.a., substrate-binding domain-containing protein from Parabacteroides merdae CL09T00C40

 Score =  593 bits (1529), Expect = e-173
 Identities = 329/913 (36%), Positives = 540/913 (59%), Gaps = 21/913 (2%)

Query: 5   LLVVLLYVAAFFSCNPEKDHATYKIGFSQCVSGDAWRRAMHQEMYRELSFYPELSLEIKD 64
           LLV+LL  A+ FSC  + +   + IG SQC    +WR++M  +M  + S YP +SL ++D
Sbjct: 10  LLVLLL--ASCFSCKTDSEKKKFVIGVSQCTLEGSWRKSMLLDMKVQASEYPGVSLLVED 67

Query: 65  AKGDNTTQIRQIRDFLDEGIDLLIVSPNESEPITPIVEEAFQNGIPVIVIDRKISSNLYT 124
           A   +  Q+ QIR  +   +DLLI+S NESEP+TPI  EA++ GIP I++DRKISS+ YT
Sbjct: 68  AADSSLLQVEQIRSLIKRKVDLLIISANESEPVTPIAIEAYRAGIPTILVDRKISSDEYT 127

Query: 125 AYVGGDNYDVGHTAGQYIRNLLKGQ-GRVLEIWGLQGSSPAKERHRGLLKGFQDSEIEIV 183
            Y+GG+NY++G  AG ++   +K +   VLE+WGL GSSPA++RHRG ++   +S I+ V
Sbjct: 128 TYIGGNNYEIGRQAGFFVNRQVKEKYPTVLEVWGLSGSSPAQDRHRGFME-VLNSRIK-V 185

Query: 184 TSIKGEWEKDTAKNRLKQHLQSGTIPEFDLVFGHNDVMAIGAHEICKNLD---IVQKKFI 240
             I G+W+ +T +   K+  +  ++ E D+VF HNDVMA+ A    + +      +  F+
Sbjct: 186 KEIFGKWKPETVE---KEIAEMDSLEEVDVVFAHNDVMAMAARRAIERMHPGLADRICFV 242

Query: 241 GVDALPGPYGGIQAVTDGILDATFLYPTGGDIAIEIAHKILSDEQVVKENILQTAVVDST 300
           G+DA+ G   G++AV  G L A+ LYPTGG +AI +A +IL+ E V ++ +L +A++D  
Sbjct: 243 GIDAVSGRGSGLEAVMHGELAASVLYPTGGSLAIRVAMQILNGEDVSRQYLLSSALIDKN 302

Query: 301 NIRIMKQQTDKIIDQQDNITRQKQRIDVQMEIYKNQRTFLFGFGLTLFVAIISLAYVFKS 360
           N   +  Q+++++D Q  I  Q++ ++  +  Y   +  +    L + + ++S  YV   
Sbjct: 303 NAGTLFIQSEQVVDYQHQIELQRENLESMLSKYTFLQNSVGIILLLMGMLLLSALYVVHV 362

Query: 361 LREKQEINEELKNKNDEILQQKDKVLSLSKKAEEATQQKFDFFTNISHEFRTPLTLIQAP 420
            R  +  N ELK  N ++ QQK+++   ++  E++T QK  FFTNI+HE +TPLTLI  P
Sbjct: 363 NRAVKRKNRELKRTNLQVQQQKEELAEANRYIEKSTAQKLQFFTNITHEIKTPLTLILGP 422

Query: 421 VEDLLAN-KDAAPFKPDLQLIRKNTMRLLRLVNQLMDLRKIDHAKMKVKAVEQELIPFLQ 479
           +  L     + +    D+++IRKN  RL R+V+QL+D RK++  KM ++  E +L+ F+ 
Sbjct: 423 LGKLSKEAPEGSSLADDIRIIRKNAERLKRVVDQLLDFRKVESNKMNMRVGEVDLVAFVA 482

Query: 480 DILNSFDKTAQKHDITLRLLADNRNLKVWYDPMMLDKVMFNLLSNAFKFTPIHGSVIVKV 539
           ++ + FD  A    I      D  ++ +W D   ++K++ NLLSNAFKFT   G+V + +
Sbjct: 483 EVKSYFDTMAATKQIHFTFEHDCPSVNIWVDRDKMEKILANLLSNAFKFTLDGGTVTIHL 542

Query: 540 TEKPLSNKVCIRVEDTGSGMSPEDTSHVFDRFYQGETYSAAGSGIGLALSKELIELHHGE 599
            +K   ++V + VED G G+  E+ + VFDRF+ G+     G+GIGL L++E + +H G 
Sbjct: 543 KDK--GDQVELSVEDNGKGIPSENIASVFDRFFTGDQNYVTGTGIGLHLTREFVHMHKGT 600

Query: 600 ICLESTLGKGTSFEVVLQMGKAHFNESEMLNGTATQYFSEENIGILEEVTPKISRDTQEE 659
           I +ES   K T F V+L  GK+HF+ES   + + T+  S    G+ +  T ++       
Sbjct: 601 IRVESVPHKSTVFTVILLKGKSHFDESCTFDLSVTELSS----GVADLNTDELQEVLNRT 656

Query: 660 KEQTLLIIEDDQQIRQYLCQQLSAHYNILEAENFEVGIAKALDKLPDLITCDLMLKQGSG 719
              T+L++EDD  I+ YL  +L  ++ +L A+N    +   + +   ++  D+M+ + +G
Sbjct: 657 YNYTVLVVEDDLDIQSYLQAELKQNFRVLVADNGVKALEVLMSEEVSMVISDVMMPEMNG 716

Query: 720 FDIIKKLKDDIRTSHIPIIVITAKSSLDERIEGIKLGVDDYISKPFSFTLLLERIKTLLA 779
           FD+ +K+K DI  SH+P++++TA S   +++ G   G D YI KPF+  ++  RI  LL 
Sbjct: 717 FDLCRKIKSDIVLSHLPVMLLTALSDDKQQMYGAASGADAYIQKPFNIEVVKLRIIKLLE 776

Query: 780 NRQKLREHYLHEL---PIEKSKSSGISTDKKFINAFNAIIEQHLSDPQFGVNTICDEIGL 836
           +R +LRE Y  +     +   +    S D  F+N F  +IE+  +DP F +    +++GL
Sbjct: 777 DRVRLREAYARDASSPAVSVKEEKAGSMDDLFMNRFLKLIEESYADPDFSIEKGSEKLGL 836

Query: 837 SRGQLYRKVKSMLGYSVNDYINRVRMKKAKRLLAENDTPIADIAFQVGFSTSAYFSTAFK 896
           SR  LYRKVK + G +  D++   R+KKA  LL      + ++A+  GF + AYFS  FK
Sbjct: 837 SRVHLYRKVKELAGVTPTDFLRNYRLKKAAALLRRKAGNVNEVAYATGFGSPAYFSKCFK 896

Query: 897 NYFGSTPSEFRDQ 909
             +  TP+E+ ++
Sbjct: 897 AVYNITPTEYLEK 909