Pairwise Alignments

Query, 539 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 512 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  189 bits (480), Expect = 2e-52
 Identities = 159/523 (30%), Positives = 246/523 (47%), Gaps = 40/523 (7%)

Query: 34  VLGTLGSCSLDEEVYSIYTPESFYSNEKEVLSSLSGVYRNFAQITGMGAEYRTLELSADQ 93
           +L  +G   L E +Y+    +++Y  E+E  ++    Y     +      Y   E++ D+
Sbjct: 10  LLFLVGCVDLSENMYNDLGKDNYYQTEQEYDAAFMNQYAFLRTMYAWNVFYLQ-EITTDE 68

Query: 94  VVVHGKIQGWWANNDFEQLMEHKWDASHAYIAGTWNTLFGTVGQANALIDALDASGLEGI 153
             +  K +  +    ++++  H W      I G W  LF  VG  N +++ L+ S  + +
Sbjct: 69  ACLPQKGRDGYDGGIYQRMHWHTWTDQDVIINGAWQELFKAVGFCNQVLNDLNNSRSDIL 128

Query: 154 EGPR-----AELQALRAFAYFYLVDLYGNVPIFTAPKVDPLDLPTQNTRAEVVDFIIAEL 208
              +     AE +ALRAF Y  LVD++GNVPI    KV  L+ PT+ TR EV +++  E+
Sbjct: 129 PENKKKLYIAESRALRAFFYSMLVDMFGNVPI--VEKVSELNPPTK-TRTEVFNYVEKEI 185

Query: 209 ETALPNLPSQTEVGSEYYGRFTREAGYTLLATLYLNAEVYTGTAQWDKALEYADMVINSG 268
                 L   T+ GS  YGRFT+EA   LL+ LYLNAEVYTGT++ D  +  +  ++  G
Sbjct: 186 AEVKDQLLRSTDTGS--YGRFTQEAALALLSRLYLNAEVYTGTSRLDDCISVSQTLLQKG 243

Query: 269 AYQLLPDYFDNFVHDNEENAEFIFGGIYTPNIPGGIGHPLVQKVLPGISGGLFGL--PYT 326
            YQL   +   F  +NE + E I+  I    I       L  + +       +    P  
Sbjct: 244 -YQLESTWDAPFAWNNENSKENIW-VIPNDEIVANEMSVLFYRNIHWSQRSQWDWKNPNG 301

Query: 327 PQNGFGTRPSVYEIYEDRDDRKSMFLAYGPMKDPRTGEVVMVERIVPDNNSNLYREGASS 386
             NG  T     E Y+   DR+  +       DP+ G   M  + +     +L   G   
Sbjct: 302 GWNGVCTVREFIETYDITHDRRCKY-------DPQNG---MYGQFMWGPQFDL--SGNPI 349

Query: 387 EGPVPYE------IIPATGIRNQPMNAGIKWIKWGLDPNTNGGNASNDIAFFRYADVLLI 440
            G   Y        +    + N   NAG + IK+ +     G    ND A FR A++   
Sbjct: 350 LGTNEYAGQQLDFTLDLPDMVNNKENAGARNIKYKVKVGAQG--MENDFALFRIAEINFN 407

Query: 441 KAEALARMGNFGEATAL--VNQVRQRSNASTLST--ITLEDILDERGRELAFELARRRDL 496
            AEA  R  N  ++ AL  +N++R R+  ST +T  +TL+++  E+GRE+ +E  RR D+
Sbjct: 408 LAEATLRKSNEVDSKALEGINKIRTRAGVSTYATGELTLDELYREKGREMCYETLRRTDM 467

Query: 497 IRFGKF-NEAWEFKEASEPFRTLYPIPSTAIDANPNLQQNPGY 538
           IRFG+F    W+     +    L+PIP  A   NP L+QNPGY
Sbjct: 468 IRFGRFIQPMWDKNYTDKETINLFPIPLQATKLNPELKQNPGY 510