Pairwise Alignments

Query, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 203 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N1B4

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 2/160 (1%)

Query: 4   AIVDIETTG-GYGKRHRITEVAAVAHNGSQILDSFQTLINPDCEIPGFITGLTGIDQSMV 62
           A++D ETTG       R TE+A V     +I++ +Q+L+N    +P FI  LTGI  +M+
Sbjct: 5   AVIDFETTGLSPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPAFIEQLTGISNAML 64

Query: 63  EGAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERIGKSFDRPKLCTVRLSRKIF 122
             AP  E + +E+  F+     +AHN  FD +F   E  RI ++  +   C++ L+R++ 
Sbjct: 65  RTAPSAEQVMNEVNEFVGITPLLAHNAAFDQKFWDYELGRIKRTRLQNFACSLLLARRLM 124

Query: 123 PGLRSYSLGRICEHKNIEIKSR-HRAFGDAEATAELFTKL 161
           P    + LG +    ++    + HRA  DAE  A L   L
Sbjct: 125 PAAPDHKLGTLTTFASLPNTGKAHRAMADAEMAANLTAHL 164