Pairwise Alignments

Query, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 246 a.a., DNA polymerase III subunit epsilon from Lysobacter sp. OAE881

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 10/172 (5%)

Query: 5   IVDIETTG-GYGKRHRITEVAAVAHNGSQILD-SFQTLINPDCEIPGFITGLTGIDQSMV 62
           I+D ETTG  + + +R+ E+  V +   +    +F   + PDC+       +TG+    +
Sbjct: 5   ILDTETTGLSWERGNRVVEIGCVEYIERRPSGRTFHVYLKPDCDFEQGAQEVTGLTLEFL 64

Query: 63  EGAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERIGKSFDR-PKLC----TVRL 117
              P FE +A+E  AF++    + HN  FD  F+ +E  R+G+ + R    C    T+ L
Sbjct: 65  ADKPVFEQVAEEFLAFIDGAELIIHNAAFDLGFLDNELRRLGEQYGRITDRCRVEDTLLL 124

Query: 118 SRKIFPGLRSYSLGRICEHKNIEIKSR--HRAFGDAEATAELFTKLLLADQE 167
           +R+ FPG R+ SL  +C+   ++   R  H A  DA+   +++  L    +E
Sbjct: 125 ARQRFPGQRN-SLDALCKRLGVDNSHRQLHGALLDAQILGDVYLALTSGQEE 175