Pairwise Alignments

Query, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 702 a.a., excinuclease ABC, C subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 11/195 (5%)

Query: 184 PPNITKEQFLSLPESIGVYYFHDANGKVIYVGKALNIRHRFKGHF---SGAGKGKQGMKS 240
           P  + +    ++P + GVY + D +G++IYVGKA  +R R   +F   S        M  
Sbjct: 12  PAPMERPDLSTIPLTPGVYLYKDESGRIIYVGKARCLRRRVASYFRDVSALTPKTVAMLR 71

Query: 241 AIYDVSFQLTGSEFLALLVEALEIKQHWPKYNRAQKAKNAPWGIYRYQDGQGFERFQVAK 300
               +    T +E  ALL+EA  IK+H P+YN   +  +  + ++R      + R ++ +
Sbjct: 72  HAVTIDTLSTTTEKEALLLEASLIKKHRPRYNIVLR-DDKQYVLFRIGAKHPYPRLEIVR 130

Query: 301 -----INRFTKPLLAFHSHHEAWSYLLEKIEKHQLCAKLCGVQKSASACFDHQAGACLGA 355
                  R+  P  +  +  E W  +       +   +  G      AC  H  G CLG 
Sbjct: 131 KARRDDGRYFGPFTSASAARETWKTIHRAFPLRRCSDRAFG--NRVRACLYHHMGQCLGP 188

Query: 356 CCGEEEPSSYNTRVE 370
           C  E    +Y   +E
Sbjct: 189 CVNEVPSETYAALLE 203