Pairwise Alignments

Query, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 206 a.a., DNA polymerase III subunit epsilon from Cupriavidus basilensis FW507-4G11

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 2/160 (1%)

Query: 4   AIVDIETTGGYGKR-HRITEVAAVAHNGSQILDSFQTLINPDCEIPGFITGLTGIDQSMV 62
           A++D ETTG   ++  R TE+A V   G +I+D +Q+L+N    IP  +  LTGI   M+
Sbjct: 5   AVLDFETTGLSPRQGDRATEIAVVLLRGGEIVDQYQSLMNAGRRIPSDVVRLTGITNDMI 64

Query: 63  EGAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERIGKSFDRPKLCTVRLSRKIF 122
             AP    +  E+  F+     VAHN  FD +F ++E   +G   D+   CT+ +SR+++
Sbjct: 65  ASAPAASKVMREVAQFVGKHPVVAHNAGFDRRFWQAELSLLGMPADQAFACTMLVSRRVY 124

Query: 123 PGLRSYSLGRICEHKNIEIKSR-HRAFGDAEATAELFTKL 161
           P  +++ L  + +   +    R HRA  DA+ T  L+ +L
Sbjct: 125 PHAQNHRLSTLVDMLRLPKAGRAHRAMADAQMTCHLWHRL 164