Pairwise Alignments

Query, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 237 a.a., DNA polymerase III, epsilon chain from Caulobacter crescentus NA1000

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 17/168 (10%)

Query: 5   IVDIETTGGYGKR-HRITEVAAVAHNGSQILD------SFQTLINPDCEIPGFITGLTGI 57
           I+D ETTG   K   R+ E+  +     +++D      SF    +P  ++P     + G+
Sbjct: 6   ILDTETTGFDPKTGDRLVEIGCI-----EVVDFMPTGRSFHEYCDPLRDMPAEAEKVHGL 60

Query: 58  DQSMVEGAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERIGKS--FDRPKLCTV 115
             + + G P F +IAD    F+ D + VAHN  FD QF+  E E+ GK+   +   + T+
Sbjct: 61  SSAFLTGKPKFHEIADRFLDFVGDSVVVAHNAAFDRQFVNFELEKCGKAPIHEERWVDTL 120

Query: 116 RLSRKIFPGLRSYSLGRICEHKNIEIKSR--HRAFGDAEATAELFTKL 161
            +++K FPG+ + SL  +C+   I ++SR  H A  DA   AE++ +L
Sbjct: 121 AMAKKRFPGMYN-SLDALCKRFKISLESRDKHGALIDAHLLAEVYLEL 167