Pairwise Alignments

Query, 575 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 40/328 (12%)

Query: 89  IATSTVKAGSEMASNHLTLSGTIEVDERNVKSVSANFDGRIDDLYVAFTGQEVKQGQRLA 148
           I+  T    S+  S  L++ G ++ ++     ++A   G++D + V    Q+VK+GQ L 
Sbjct: 32  ISVVTESVQSQQISQSLSVVGKLKAEQS--VDIAAEVAGKVDMIAVQ-ANQQVKKGQILI 88

Query: 149 RIYSPDLIAAHRELLEAK-----------------KATGISPKLYEA--AKQKLKQWQLT 189
           ++   D   A   L+EAK                 K   I+P   +A  A+ ++ Q +L 
Sbjct: 89  KL---DDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQRARVEIGQARLN 145

Query: 190 DAQITKMANDEDYQPHFDIYAATSGVVTDRKVAAGDYVSRGQVLFEITNLNKVWVMLDAY 249
            AQ    AN  D      I A   G V     + G +VS G  L  + NL+ + + L   
Sbjct: 146 AAQ----ANLADLH----ITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDLQIP 197

Query: 250 EQGLGQISAGDQIQFSVNALPGEEFSAKVAFIDPVVSADSRSAKVRAEVNNFSGKLKPGM 309
           E+ L Q+S G ++Q S  A P  +F   V  +D  ++ ++ + +VR    N   +LKPGM
Sbjct: 198 ERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLKPGM 257

Query: 310 FVTAKLSTQDEAPVDAGVMVPKSSILWTGRRSVVYRQVGSEMKPAFEMVQVELGPVAGEM 369
            ++A++      P  +  ++P  ++ ++G +  VY  +G +     +  +V LG      
Sbjct: 258 LMSARI----HFPAISAPIIPVQALEYSGTKRFVY-VIGED--NVAKRREVSLGARVENQ 310

Query: 370 QQVLTGLSPGDQIVTNGVFAVDGAAQLS 397
             +  GL  G++IV  G+  +   A++S
Sbjct: 311 VVIEKGLQIGEKIVVQGIVNMRDNARVS 338