Pairwise Alignments

Query, 575 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 360 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 19/279 (6%)

Query: 138 GQEVKQGQRLARIYSPDLIAAHRELL-----EAKKATGISPKLYEAAKQKLKQWQLTDAQ 192
           G  VK+G  L ++ + + IA  +          ++   IS  +      +L++ +L    
Sbjct: 81  GDIVKKGDLLVQLQNAEQIAKVKVAQVKVSDNQRELARISSLVTSRTVAELERDRLQTLI 140

Query: 193 ITKMANDEDYQPHFD---IYAATSGVVTDRKVAAGDYVSRGQVLFEITNLNKVWVMLDAY 249
            T  A  E  Q   +   I A  +G +  R+V+ G  V+ G  +  + +++K+ +     
Sbjct: 141 DTTRAELEQAQSSLNDRSIVAPFNGRLGLRQVSVGSLVTPGTEITTLDDISKIKLDFSVP 200

Query: 250 EQGLGQISAGDQIQFSVNALPGEEFSAKVAFIDPVVSADSRSAKVRAEVNNFSGKLKPGM 309
           E+ +  +  G Q++    A P E F  KV  ID  V+  +R+  VRAE+ N   +L PGM
Sbjct: 201 ERFIQDLQPGKQVEAKAVAFPDEIFKGKVISIDSRVNPTTRAVIVRAEIPNPDLRLLPGM 260

Query: 310 FVTAKLSTQDEAPVDAGVMVPKSSILWTGRRSVVYRQVGSEMKPAFEMVQVELGPVAGEM 369
            +  KL  +        +M+P+S+I+   +   VY           E  QV +G      
Sbjct: 261 LMKVKLIKRSR----EALMLPESAIIPIQKEHFVY---SVNKDNVIERKQVTIGIRTRGW 313

Query: 370 QQVLTGLSPGDQIVTNGVFAVDGA----AQLSGKYSMMA 404
            ++L GL  G+ +V  G+  V        +L+ K+S ++
Sbjct: 314 VEILGGLEIGENVVIRGLLKVHPGDVVKTELAEKFSYLS 352