Pairwise Alignments

Query, 460 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 475 a.a., sigma-54 dependent nitrogen response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  290 bits (743), Expect = 5e-83
 Identities = 179/480 (37%), Positives = 280/480 (58%), Gaps = 38/480 (7%)

Query: 9   ILIVDDNEDLLFAAKMLLKKYAKEVTIEKDPRRIPFLVNNNNYDVILLDMNFTEDTTSGK 68
           ILIVDDN  +  A  ++L+    +V     P     L+  ++ D+++ DMNFT DTTSG+
Sbjct: 4   ILIVDDNHAICQALGLMLEINGYQVLTCHTPDDALNLIAAHDIDLVIQDMNFTRDTTSGE 63

Query: 69  EGFHWLKQIKEIDPKAVVILITAFGDVEMAVQALKEGATDFILKPWQNEKLLATLS---A 125
           EG      ++E  P   +IL+TA+  +E AV+ +K GA D++ KPW + KLL +++   A
Sbjct: 64  EGRQLFYALRERQPDLPIILMTAWTQLETAVELVKVGAADYMGKPWDDAKLLNSITNLVA 123

Query: 126 ASRLKESYDQVDNISQKSRQLQADMKKPFSEIIGQSSSMKNIFSIIDKVAQTDANVLILG 185
             +L  +  Q++ ++ + +   AD +     I+  S +M+    +  ++A++D +VLI G
Sbjct: 124 LYKLACTNHQLERVNSQRQVAIADAE--LCGIVFGSGAMQRCIDLALQLARSDVSVLITG 181

Query: 186 ENGTGKELIARAIHDRSLRRDEIFVGVDMGAITETLFESELFGHKRGAFTDAKEDRAGRF 245
            NG GK+ +A  IH  S  +++ F+ V++GA+   L E+ELFG + GAFT A + R GRF
Sbjct: 182 PNGAGKDKLADIIHANSPLKNKPFIKVNVGALPMELLEAELFGAEAGAFTGANKARMGRF 241

Query: 246 EVADKGTLFLDEIGNLSMPLQSKLLTVLQKREVTRIGTNKSIPVDIRLICATNMKVHDMV 305
           E AD GTLFLDEIGNL +  Q KLL VLQ  E  R+G++K++ V +R+I ATN  +   +
Sbjct: 242 EAADGGTLFLDEIGNLPLSGQVKLLRVLQTGEFERLGSHKTLKVKVRVISATNADLAQDI 301

Query: 306 MENTFRQDLLYRVNTVEIFLPPLRERQDDIPLLANHFLKVYAKKYRKDFSGFKPAAIQLL 365
            E  FR+DL YR+N +E+ LPPL +R DDI  L  HF+        + FS  KPA   LL
Sbjct: 302 AEGRFREDLFYRLNVIELALPPLNQRIDDILPLVKHFVG-------EGFSLSKPAQQALL 354

Query: 366 QNYSWPGNIRELQHAIERAIIMAEGQELDSRDF---------------FFLSS------- 403
           Q + WPGN+REL++A +RA ++A+ + L   DF               F L         
Sbjct: 355 Q-HRWPGNVRELENACKRAALLAQSRVLTEADFGLPPVQARQLSATNAFALGQAAHLAAA 413

Query: 404 -KPSAEKVKTNGTLNLD--EVEKNVIQKAIDKNGGNISKAAKELGLTRASLYRRLEKYGL 460
            +P + +      ++ +  +V +  I+ A+ ++ G I++ AK LGL+R +LYRR++K+GL
Sbjct: 414 FEPQSHQSVFYSEIHSEAQDVSREDIEAALQQHNGVIARVAKSLGLSRQALYRRMDKFGL 473