Pairwise Alignments

Query, 796 a.a., Mismatch repair ATPase (MutS family) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 862 a.a., DNA mismatch repair protein MutS from Vibrio cholerae E7946 ATCC 55056

 Score = 91.7 bits (226), Expect = 2e-22
 Identities = 121/531 (22%), Positives = 214/531 (40%), Gaps = 60/531 (11%)

Query: 20  IREECTSALGTAMVEKVGFS--NDINLLNKLLDQTEEFRQILVSGELFPSSNYLNIYPYL 77
           + + C + +G+ M+++       D   LN+ LD   E ++  + GEL P    +     +
Sbjct: 299 VLDHCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERI 358

Query: 78  EKAKIEGTFLYEDDFHEIKLSLITLKDCVDFFRRNETEYPQLFQLIG----MVDLDNTLL 133
             A++        D   ++ ++  L +       +E + P L +L      M +L + L 
Sbjct: 359 -LARLALRSARPRDLARLRHAMQQLPELHSVM--SELKQPHLTELRTHAEPMDELCDLLE 415

Query: 134 RAIER----VLNDKGKIKDNATRELGLIRGQIIYEENRLRKVLDRIFREAKAKRLTPDDA 189
           RAI+     V+ D G I D  + EL   R       N   + L+R+  E +         
Sbjct: 416 RAIKENPPVVIRDGGVIADGYSAELDEWRDLA----NGATEFLERLEAEER--------- 462

Query: 190 SITIRGGRMVMPVLAENKRKIKGFVHDESATGQTVFLEPAEVLD---------INNELKE 240
                  R  +  L      + GF + + + GQ+  + P  V           I  ELK+
Sbjct: 463 ------DRHGIDTLKVGYNNVHGF-YIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQ 515

Query: 241 LEYMERREVQKILM-------QLTDTLRPFIPALRSAYKFLGMVDFIRAKARLALKMDAH 293
            E        + L        +L D L P +  L+     +  +D ++  A  A  ++  
Sbjct: 516 HEDKVLNSKSRALALEKQLWEELFDLLMPHLEQLQQLAASVAQLDVLQNLAERAENLEYC 575

Query: 294 KPTLQKAKVIEWYNARHPVLEHALKQQQRPIVPLNIHLDHNSRLLVISGPNAGGKSVTLK 353
           +PTL +   I     RHPV+E  + +   P +   I L+   R+L+I+GPN GGKS  ++
Sbjct: 576 RPTLVQEAGIHIQGGRHPVVERVMNE---PFIANPIELNPQRRMLIITGPNMGGKSTYMR 632

Query: 354 TVSLVQYMLQCGLLVPMDPHSKCTVFHHFFIDIGDEQNIENDLSTYSSHLMSMKYFTQFA 413
             +L+  M   G  VP +  S        F  IG   ++ +  ST+   +         A
Sbjct: 633 QTALIALMAHIGSYVPAESAS-IGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNA 691

Query: 414 DKQTIFFIDEFGTGTEPQFGGAIAESILLALNKS-GAYGIVTTHYGNLKQIAAKNQGMTN 472
            + ++  +DE G GT    G ++A +    L K  GA  +  THY  L ++      + N
Sbjct: 692 TRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLAN 751

Query: 473 GAMRFDI----DKLEPMYQLDIGKPGSSFALEIATKIGIHKDIISYAKEQI 519
             +  D     D +  M+ +  G    S+ L +A   G+ K +I  A+ ++
Sbjct: 752 --VHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIKNARAKL 800