Pairwise Alignments

Query, 662 a.a., ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1000 a.a., cyclic nucleotide-binding domain (cNMP-BD) protein from Synechococcus elongatus PCC 7942

 Score =  183 bits (464), Expect = 4e-50
 Identities = 143/573 (24%), Positives = 261/573 (45%), Gaps = 16/573 (2%)

Query: 96  QEHFVISYGLLEDRFVLGDPAKGILMYPENELEAIWQSKALLKIVPGANFQTHKIDKRNR 155
           +E   + Y +        DP +G++     E +  W +   + +     F      +R  
Sbjct: 372 EEGHAVLYAVDATSITFADPRQGLITLSLAEFQQRWGNAGTILLATKTQFTQ---SQRFG 428

Query: 156 WRWFKELIKEDIPILTVAMTLGILMALAGLSTAIFSQKLIDDFLPNMETEKIAIGFAALA 215
             WF   I+     L   +   +++ L  L+  +  Q++ID  +       +   FA L 
Sbjct: 429 LSWFWPSIQRYRVRLIEVLIASLVVQLFTLANPLIIQQVIDKVIGQGSLNNLN-SFAVLL 487

Query: 216 LLLGL-RALLGYIQGVFMARQGKELNIRLVKSFVQKIIRLPIPVLNGYSTGDLVARMNDS 274
           ++LG+ + LL  ++    A     ++++L    + ++++LP+        G+L +R+ + 
Sbjct: 488 VILGVFQGLLSSLRTYLFADTTNRIDLKLGSDIIDRLLKLPLRYFERRPVGELSSRVQEL 547

Query: 275 MRIRKTVALLTGNVAINVLVVLVSMGYIFHL---SWPIGLVCLVGLVFFTVVGIRFHKPI 331
            +IR   + LTG     V+  + S+ YI  +   SW + LV L  +  F  +   F  P+
Sbjct: 548 EKIR---SFLTGTALTTVMDAMFSVIYILVMLVYSWFLTLVALSTVPIFVAITF-FASPV 603

Query: 332 LTFQ-KEVMQAHSQNEAQYLESLTGIHTVRSYSKEEVFKERINMVYELYQGKSYDLAIVA 390
           +  Q +E  + +++ ++Q +E L+GI TV++ + E   + +    Y  Y    +     +
Sbjct: 604 VRRQLREKAERNAETQSQLVEVLSGIQTVKAQNIELKARWQWQERYARYIAAGFRNINTS 663

Query: 391 NRFGFFTQLVSAVFLSLMFALGVWMILEGHLLLGELMAVLTVGGGIIPGAASLIIANIQL 450
                 T   + +   L+  +GV+++ +  L LG+L+A   + G +      L       
Sbjct: 664 TAASSLTNFFNQLSGLLVLWVGVYLVFDNQLSLGQLIAFRIISGYVTQPLLRLAQLWQNF 723

Query: 451 QEAKVAFDRLYEIASLEKENPGKDFGSKEKHSTKSDHQLTLEEVSFRFPGQKAI-LNNIN 509
           QE  ++ +RL +I    +E+   D G           ++    +SFRF  Q  + L+N+ 
Sbjct: 724 QETALSLERLADIVDTPQESDDDDQGKIPMPMING--KVEFRNLSFRFGEQGPLQLSNVT 781

Query: 510 FSLGQGEMLALFGQVGSGKTTLVNLLQGFYMPEKGCLKIGDKPMDSWLMEHWRKQVAVVS 569
             +  GE + + GQ GSGK+TL+ LL   Y P +G + I    +    +   R+Q+ +V 
Sbjct: 782 LEIPAGEYVGIVGQSGSGKSTLMKLLPRLYSPLEGEILIDGYDISKVELYSLRRQIGIVP 841

Query: 570 QTEKIFNTTILDNICLSHDVEEWRRCGEFLNQSGLERFFGQFDQGVMTLCGENGRNLSGG 629
           Q   +F  T+ +NI L+               +G   F      G  T  GE G  LSGG
Sbjct: 842 QDSLLFQGTVEENISLTKPNATTDEIITAAKAAGAHDFIMTLPLGYNTRVGERGGALSGG 901

Query: 630 QRQLVAISRALYKQPKFLVLDEATSAMDFDTER 662
           QRQ +AI+R + + P+ L+LDEATSA+D+DTER
Sbjct: 902 QRQRIAIARTVLQNPQLLILDEATSALDYDTER 934