Pairwise Alignments

Query, 1158 a.a., Polysaccharide lyase family 8, C-terminal beta-sandwich domain./Polysaccharide lyase family 8, super-sandwich domain./Polysaccharide lyase family 8, N terminal alpha-helical domain. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 701 a.a., chondroitinase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  464 bits (1194), Expect = e-134
 Identities = 264/708 (37%), Positives = 389/708 (54%), Gaps = 28/708 (3%)

Query: 7   LVLVWLGLSIQVPLLAQNDFDIIMDRIFADFQRIPSTSSLDSQVASLRASMDVDGSWPDI 66
           L+ +W+ L   +         +IMDRI  D +R     S+D   A    ++  DGSW DI
Sbjct: 9   LLFLWMCLPNVIRAQQTETTKLIMDRIINDLKR--PAKSVDVAAAVSLKTIQADGSWKDI 66

Query: 67  DYTDQSQTNWQPVKHYERVSVLAKAYSRQGSSYYGDASVLADITDAMNYWLGLTPVPYST 126
            Y D+  T WQP +H   +  L +AY  + S Y+ D  V   I  +  YW    P   S+
Sbjct: 67  PYQDKEITKWQPARHLVNLENLIQAYVGKESRYFEDEKVFDGIGRSFQYWYDHDPK--SS 124

Query: 127 NWWFLSIKVPKDIGNILIALRNAPVGIDQALENSMITWMTKGVSMTVSPGKD-GSNLTDI 185
           NWW   I  P+ +G +LI +R     +D  LEN +I  M +G       GK  G+N TD+
Sbjct: 125 NWWHNEIATPQALGEMLIMMRYGKEHLDVNLENKLIERMKRG-----DIGKQTGANKTDV 179

Query: 186 GQHYIMRACLTEDSALMQHAVTETGNSIK-VSSGEGIKRDHSYMAHGAQLYIYGYGREYV 244
             HY  RA LT +  L++ +  +    I+ V   EG++ D+SY+ HG QL I  YG  ++
Sbjct: 180 ALHYFYRALLTNNQDLLRFSTDQLFEPIQLVYRKEGLQYDYSYLQHGPQLQISSYGSVFI 239

Query: 245 SGIRNIAVNITGTSYAYPPEKIAIFSDFVRKGFIKTSRGGFADFNAFGRSITRSGV---- 300
           +G+  +A  + GT Y    EK+ +FS + R  ++K  RG + DFN  GR I+R  +    
Sbjct: 240 TGVLKLANYVRGTEYGLNGEKLELFSKYYRNSYLKAIRGSYIDFNVEGRGISRPNILDKS 299

Query: 301 GRADVNLIEQVRNFDLPAYQASYDTVIARMRGQEAPDYGVTPEHRHYWQTDYTIHHRPGY 360
              +  L+ Q+ +F      + ++  IAR   +E PDY + P H+H+W  DY  H R  Y
Sbjct: 300 NERNRLLVAQLLDFK---NTSDWNAAIARTENKETPDYKIQPYHQHFWNGDYVQHGRSTY 356

Query: 361 MVGLRTVSVRTVKSEMGNGENIKGHFLTDGATYIAVDGDEYFGIYPVWDWNKVPGTTTPA 420
              +R VS RT +SE GN EN+ G +L+DGAT I + G EY+ I PVW+W+K+PG T+  
Sbjct: 357 AFNVRMVSKRTKRSESGNKENLLGRYLSDGATNIQLRGPEYYNIMPVWEWDKIPGVTSRD 416

Query: 421 W-TSFPARSSWGTNPGKSSFVGGVSDGEYGASVYDMNDYSTRAKKAWFFFDDEVVCLGAG 479
           +    P    WG   G + F GGVSDG YGAS Y ++  S +AKK+WFFFD E+VCLGAG
Sbjct: 417 YLVDRPLTQFWG-EQGSNDFAGGVSDGVYGASGYMLDYDSLQAKKSWFFFDKEIVCLGAG 475

Query: 480 IYSSSAEAINTTVNQTLLKGNVVADVGAGGVSLGAGEHAYQDDL--KWVWHRDVGYVFPD 537
           I S++ E++ TTVNQ  L G V   +GA    +  G+ A  +D    W+ H  VGY FP+
Sbjct: 476 INSNAPESVTTTVNQCWLNGEV---LGADHEQIAGGKVAVFNDKHPSWLLHDGVGYYFPE 532

Query: 538 GGHLKLSTQSQTGTWNSINQTQSTAEVSEEVFKLWFEHGETPVDDGYAYVLLPGAT-TQE 596
             +L LST++Q G W  IN   + ++VS +VFKLW  HG  PVD  Y+Y++LPG T   E
Sbjct: 533 QNNLTLSTETQKGNWYHINNAHAKSDVSGQVFKLWINHGAKPVDAKYSYIILPGITKAGE 592

Query: 597 TADFDVQRFTILANADTVQAVGHPALDMVQVVLYEPGEYDLNGLQLNVNQPCVLILRDAG 656
             +F      I+AN + +QAV H ALD+ QV+ Y+ G   L G++++ ++ C L++    
Sbjct: 593 LKNFKASDLIIVANTEKIQAVYHKALDIFQVIFYQAGTITLAGMEISTDKACALMVNHVN 652

Query: 657 TAEVKVTAADPSQGNAGKLRVGLKNESFSDMKMVDLEWPAGDLSGSSV 704
             ++  + ADP Q     + +  K+     +K +  E P  +L+GS+V
Sbjct: 653 GNQL-WSVADPLQKEL-LINMICKDVKTGKIKKLSAELPQRELAGSTV 698