Pairwise Alignments

Query, 1158 a.a., Polysaccharide lyase family 8, C-terminal beta-sandwich domain./Polysaccharide lyase family 8, super-sandwich domain./Polysaccharide lyase family 8, N terminal alpha-helical domain. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 732 a.a., chondroitin lyase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  374 bits (961), Expect = e-107
 Identities = 242/738 (32%), Positives = 378/738 (51%), Gaps = 46/738 (6%)

Query: 6   LLVLVWLGLSIQVPLLAQNDFDIIMDRIFAD-FQRIPSTSSLDSQVASLRASMDV-DGSW 63
           L+ L  LG +      AQ+ F  I+ R+  +    +    SLD +V    A +++  G W
Sbjct: 7   LVFLFILGSTFFSHTKAQSVFQTILQRVHQEQIDDVKDIKSLDKRVEDNLAGLNLKSGKW 66

Query: 64  PDIDYTDQSQTN--WQPVKHYERVSVLAKAYSRQGSSYYGDASVLADITDAMNYWLGLTP 121
             I+Y D  +    W PV   ER+  +  AYS   SSYY +  +   I  +++Y++   P
Sbjct: 67  ESINYADYKRIKPGWLPV--LERIRTMTLAYSFPKSSYYKNKQIFEAIHKSLSYFINHKP 124

Query: 122 VPYSTNWWFLSIKVPKDIGNILIALRNAPVGIDQALENSMITWMTKGVSMTVSPGKD--- 178
           +PY  NW+   I  P+ +   L+ +R     +D  LE + +  + K  S+T S G++   
Sbjct: 125 LPYCDNWYQQGITRPQTLALSLVNMRFGESPLDGELEKNTLAVICKDTSVT-SIGRNNPM 183

Query: 179 -----GSNLTDIGQHYIMRACLTEDSALMQHAVTETGNSIKVSSGEGIKRDHSYMAHGAQ 233
                G+N   I   +I  + L  +  +++  V E    I+ ++GEGI+ D SY  H   
Sbjct: 184 HRFNFGANKAQIAMGWIFISALLANEKMLEVGVKEAYLPIQYTTGEGIQYDLSYDMHYGY 243

Query: 234 LYIYGYGREYVSGIRNIAVNITGTSYAYPPEKIAIFSDFVRKGFIKTSRGGFADFNAFGR 293
           LY  GYG E+++ +   A    GT YA   EK+ +F  F+ +      RG + D+N  GR
Sbjct: 244 LYNGGYGVEFMTSVVKSAAYTFGTKYALKGEKLDLFRKFILESIFGVIRGKWMDWNVMGR 303

Query: 294 SITRSGVGRADVN-LIEQVRNFDLPAYQASYDTVIARMRGQEAPDYGVTPEHRHYWQTDY 352
            I+R G  + D +  +E++   D P  +  Y  +  RM+G+E   + V P HRHYW TDY
Sbjct: 304 GISRIGAIQKDYSSYLEKLEQID-PQGKEQYSAIRKRMKGEEPVFFKVEPFHRHYWNTDY 362

Query: 353 TIHHRPGYMVGLRTVSVRTVKSEMGNGENIKGHFLTDGATYIAVDGDEYFGIYPVWDWNK 412
           T+H RP Y++ +  VS R    E+GN EN KG + ++G   + + G+EY+ I+P+W+W K
Sbjct: 363 TVHTRPSYLMSIHAVSNRKYSQEIGNLENQKGFWGSEGTMNLQLKGNEYYNIFPLWNWTK 422

Query: 413 VPGTTTPAW--TSFPARSSWGTNPGKSSFVGGVSDGEYGASVYDM-NDYSTRAKKAWFFF 469
           +PGTT P    T        G   G  SF GGVSD  YGA+ Y M ND  T AKK+WF F
Sbjct: 423 LPGTTLPDTLPTIKDKAPGVGDRRGTHSFSGGVSDSSYGATAYVMDNDLYTSAKKSWFMF 482

Query: 470 DDEVVCLGAGIYSSSAEAINTTVNQTLLKGNVVADVGAGGVSLGAGEH----------AY 519
           DDE+VCLGAGI S+    + TT+NQ +L GN        G+++ AG             +
Sbjct: 483 DDEIVCLGAGIKSTLPYPVATTLNQVMLSGN--------GLTICAGSRVTRYQKGINLTF 534

Query: 520 QDDLKWVWHRDVGYVFPDGGHLKLSTQSQTGTWNSINQTQSTAEVSEE---VFKLWFEHG 576
           ++ ++WV H  VGYVFP GG+  LS +++   W  ++ T   A    E   VF+L  +HG
Sbjct: 535 KNQVEWVLHDHVGYVFPQGGNAHLSAENRISDWAGVSMTGEEANKKIEQKSVFQLSLQHG 594

Query: 577 ETPVDDGYAYVLLPGATTQETADFDVQR--FTILANADTVQAVGHPALDMVQVVLYEPG- 633
             P ++ YAY+L+P           ++R   TI  N + +QAV H  L + Q+V Y    
Sbjct: 595 IRPENEKYAYILVPAIKNSIEMKHYLERKNVTIKFNNEKLQAVYHNKLKIWQMVFYAGNM 654

Query: 634 EYDLNGLQLNVNQPCVLILRDAGTAEVKVTAADPSQGNAGKLRVGLKNESFSDMKMVDLE 693
            +  + + L+ + P +L+L+     + ++  ADPS     K++V LK  S  D +  DL+
Sbjct: 655 SFKDDEINLSTDIPSILMLKKIEKGKYQLYVADPSH-LYEKMKVSLK-ISGGDTQTFDLD 712

Query: 694 WPAGDLSGSSVGGTIDQQ 711
            P    +G +V   ++ +
Sbjct: 713 LPLKQYAGQTVSIVVNSE 730