Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 9e-27
 Identities = 89/374 (23%), Positives = 179/374 (47%), Gaps = 43/374 (11%)

Query: 213 KNELLDMLVKHSSDMIGVFDVNWMPKYLSPSFEQAFGFTRNQLMDPSFFEGFRSKVKDME 272
           +  LL   +  S D+I   +        + + E+  G   ++L+  + ++ +R   K++ 
Sbjct: 153 RTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVGLTPWDVYR---KEIA 209

Query: 273 KVVVDGVKRYRFTNLNSAGERIWLE------SIFDT----LYDEDGEIQGHMAIMRNISE 322
           + +V+  ++  F N  +     WLE      S F+      Y++DG   G +   R+I+E
Sbjct: 210 QSIVETDQQV-FNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKDGRHLGLVGFGRDITE 268

Query: 323 EVIGEQKMSEALEKEIALNKMKSQFISITSHEFKTPLSTIKSSIEICNIELQRQLQEHPS 382
                ++  E+LEK    ++ K+ FIS  SHE +TPL+ I        + L R L + P 
Sbjct: 269 R----KRHEESLEKA---SRDKTTFISTISHELRTPLNGI--------VGLSRMLLDTPL 313

Query: 383 EQKFKKHFNRVNNEVDRMNSLLVNLLNLEKINQGVIQVSSKGKKINSYLRSV---LEDWV 439
             + +KH   +N     + ++  ++++++K ++  +++         ++  +        
Sbjct: 314 SGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMA 373

Query: 440 DQDSVHFE----TTLPEDFIHSIDVSLMNQVITNLVENALKYGNRDEKVIVKAHHTDR-- 493
           +Q  + F+    T LP   +  +D + + QV+ NL+ NA+K+      V+  +   D   
Sbjct: 374 EQKGLRFDLERLTDLPS--LVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQH 431

Query: 494 -ELVVSVRDFGDGIPEKEQEHLFKPFF--RASNSSKYDKGSGLGLMITKKFIELQNGTVH 550
            E+ + V D G GIPE EQE +F  ++  ++   + +  G+G+GL ++++ I+L  G + 
Sbjct: 432 AEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDIS 491

Query: 551 FESEEGVGTCFFLT 564
             SEEG G+ F +T
Sbjct: 492 VNSEEGFGSTFTVT 505