Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (256), Expect = 2e-26
 Identities = 79/258 (30%), Positives = 128/258 (49%), Gaps = 32/258 (12%)

Query: 328 QKMSEALEKEIAL--------NKMKSQFISITSHEFKTPLSTIKSSIEICNIELQRQLQE 379
           QK+ E   +E+ L        N+ KS F+++ SHE +TPL+ +   I+I   EL     E
Sbjct: 188 QKLVEIRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILRGELTSYQVE 247

Query: 380 HPSEQKFKKHFNRVNNEVDRMNSLLVNLLNLEKINQGVIQVSSKG----KKINS---YLR 432
                       ++ N  + +  ++ ++L+L +I  G   +        KK++    Y R
Sbjct: 248 L---------LEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHR 298

Query: 433 SVLEDWVDQDSVHF--ETTLPEDFIHSIDVSLMNQVITNLVENALKYGNRDEKVIVKAHH 490
            + +D      VHF  ++       +  D + + Q++ N+V NA+K+  +  +V V   +
Sbjct: 299 QIAQD----KGVHFYVQSNKNPTLEYYTDSARLTQILFNIVGNAIKF-TKQGQVDVVLDY 353

Query: 491 TDRELVVSVRDFGDGIPEKEQEHLFKPFFRASNS-SKYDKGSGLGLMITKKFIELQNGTV 549
           T   +V  V+D G GI +   E LF PF +A NS ++   G+GLGL ITK  +EL  GT+
Sbjct: 354 TKDGVVFRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTI 413

Query: 550 HFESEEGVGTCFFLTFPL 567
             ESE G+GT F L  PL
Sbjct: 414 QVESEFGIGTTFTLYIPL 431