Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  114 bits (285), Expect = 2e-29
 Identities = 83/310 (26%), Positives = 161/310 (51%), Gaps = 26/310 (8%)

Query: 265 RSKVKDMEKVVVDGVKRYRFTNLNSAGERIW--LESIFDTLYDEDGEIQGHMAIMRNISE 322
           R    D+++ +++  ++     L  + ER+   +      +  ++ E++ ++ I+R  ++
Sbjct: 392 RVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLIKSQNKELESNLLIIRKQND 451

Query: 323 EVIGEQKMSEALEKEIALNKMKSQFISITSHEFKTPLSTIKSSIEICNIELQRQLQEHPS 382
           E+            ++A NK+K +F++ TSHE +TPL  +     I   E        P 
Sbjct: 452 EL------------QLA-NKLKDEFLATTSHELRTPLHGM-----IGIAEALISGANGPI 493

Query: 383 EQKFKKHFNRVNNEVDRMNSLLVNLLNLEKINQGVIQVSSKGKKINSYLRSVLE---DWV 439
               K   + + +   R+ +L+ +LL+  K+  G + +      ++S  R VLE     +
Sbjct: 494 SAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLL 553

Query: 440 DQDSVHFETTLPEDFIH-SIDVSLMNQVITNLVENALKYGNRDEKVIVKAHHTDRELVVS 498
            + ++     + E  +  S D   + QV+ NL+ NA+KY + + K+++ A + D ++ V 
Sbjct: 554 GKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKYTS-EGKIVISATYIDDKVRVQ 612

Query: 499 VRDFGDGIPEKEQEHLFKPFFRASN-SSKYDKGSGLGLMITKKFIELQNGTVHFESEEGV 557
           V D G GIP ++ EH+F+P  +A + +S+Y +G+GLGL I+++ IEL +GT++  S+  V
Sbjct: 613 VVDTGQGIPAEQLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLIELMHGTLYVSSQPMV 672

Query: 558 GTCFFLTFPL 567
           GT F  T PL
Sbjct: 673 GTTFSFTLPL 682