Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 661 a.a., PAS domain S-box protein from Synechocystis sp000284455 PCC 6803

 Score =  105 bits (261), Expect = 7e-27
 Identities = 70/269 (26%), Positives = 135/269 (50%), Gaps = 20/269 (7%)

Query: 307 DGEIQGHMAIMRNISEEVIGEQKMSEALEKEIALNKMKSQFISITSHEFKTPLSTIKSSI 366
           DG +   + ++++I +    E+  S AL++E  LN+++S+FI+  SH+F+TPL+TI    
Sbjct: 401 DGSLDFCVVMVQDIGDRKAMERSTSLALQREKELNQLRSEFITAISHQFRTPLTTIS--- 457

Query: 367 EICNIELQRQLQEHPSEQKFKKHFNRVNNEVDRMNSLLVNLLNLEKINQGVIQVSSKGKK 426
             C   +  + +   +++K  ++   +     +++ L+ +++ +    + +  V  KG  
Sbjct: 458 --CAASIMGKFEAKLTDEKRVQYIESILRGAKQIDELIGDIITINLNQEEIEPVLVKGSL 515

Query: 427 INSYLRSVLEDWVDQDS-------VHFETTLPEDFIHSI--DVSLMNQVITNLVENALKY 477
           I+       +D +D+         ++F   L      ++  D  L+  V+T+L+ N +KY
Sbjct: 516 ID-----FCQDIIDKTEYLSYPYKINFCACLSSKTRLAVKFDPVLLKPVLTHLLANGIKY 570

Query: 478 GNRDEKVIVKAHHTDRELVVSVRDFGDGIPEKEQEHLFKPFFRASNSSKYDKGSGLGLMI 537
                 + +    +  E++  ++D+G GIPE E E +F+PF R SN   +  G G+GL I
Sbjct: 571 SPTILTIDLLLLESPEEIIFEIQDYGIGIPETELEKIFEPFQRGSNVG-HIAGIGIGLTI 629

Query: 538 TKKFIELQNGTVHFESEEGVGTCFFLTFP 566
            +K I    G +  +SE G GT   L  P
Sbjct: 630 ARKLITFYGGRIEIKSELGQGTTVSLVIP 658