Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1560 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score = 97.1 bits (240), Expect = 5e-24
 Identities = 85/321 (26%), Positives = 152/321 (47%), Gaps = 27/321 (8%)

Query: 262  EGFRSKVKDMEKVVVDGVKRYRFTNLNSAGERIWLESIFDTLYDEDGEIQGHMAIMRNIS 321
            EGFR  V   E+   DGV+   +T +   G  + +  +   + ++DG I G++ + +++S
Sbjct: 817  EGFRVFVHRSER---DGVEAQEWTYVRKDGGHLEVLLVVTAIREDDGRIAGYLGVAQDVS 873

Query: 322  EEVIGEQKMSEALEKEIALNKMKSQFISITSHEFKTPLSTIKSSIEICNIELQRQLQEHP 381
                 E+ +  A +     + +K QF++  SHE +TP++ I   + +     +  L  H 
Sbjct: 874  RRKEFERALVLAKQAAEEASVVKGQFLANMSHEIRTPMNAILGMLTLVQ---RTALTPHQ 930

Query: 382  SEQKFKKHFNRVNNEVDRMNSLLVNLLNLEKINQGVIQVSSKGKKINSYLRS---VLEDW 438
            ++   K H     +    +  LL ++L+  KI  G + +     ++ + LR    VL   
Sbjct: 931  ADYVCKAH-----SAAGSLLGLLNDILDFSKIEAGKLHLEPHPFRLETVLRDLAVVLSGS 985

Query: 439  VDQDSVH----FETTLPEDFIHSIDVSLMNQVITNLVENALKYGNRDEKVI---VKAHHT 491
                 V         LP+ FI   D   + QV+ NL  NALK+ ++ + ++   V A   
Sbjct: 986  YGDKGVEVLFDIAPHLPDSFIG--DDLRLRQVLLNLAGNALKFTDQGQVIVSVGVLARED 1043

Query: 492  DR-ELVVSVRDFGDGIPEKEQEHLFKPFFRASNS-SKYDKGSGLGLMITKKFIELQNGTV 549
            DR  + ++V D G GI   +   +F  F +A  S ++   GSGLGL IT+  +E   G +
Sbjct: 1044 DRLTMRMAVSDTGIGIAADQLASIFGAFEQAETSTTRRFGGSGLGLTITRHLVERMGGVL 1103

Query: 550  HFESEEGVGTCFF--LTFPLT 568
              ES+ G G+ F+  +T P++
Sbjct: 1104 RVESQPGRGSRFWFDITLPVS 1124



 Score = 33.1 bits (74), Expect = 9e-05
 Identities = 41/188 (21%), Positives = 74/188 (39%), Gaps = 37/188 (19%)

Query: 155 IPTLMDNESLGFLALVN-VEEV--HLEKCEGPLRELTVAFALIYLFELRMAGSGATVNGK 211
           IP ++D E LGF ALV+ V E+    +K +  LRE       I                 
Sbjct: 584 IPDVVDGEVLGFYALVHDVSELVEGRQKLDAALRENEALLRTI----------------- 626

Query: 212 SKNELLDMLVKHSSDMIGVFDVNWMPKYLSPSFEQAFGFTRNQLMDPS---FFEGFRSKV 268
              +LL  +   + ++I + D          +F +  G+T+++L+         G   K 
Sbjct: 627 -DEQLLCSITDRNGNIISIND----------NFCKLMGYTKDELLGLDHRIMNSGLHDKT 675

Query: 269 KDME---KVVVDGVKRYRFTNLNSAGERIWLESIFDTLYDEDGEIQGHMAIMRNISEEVI 325
              +    +   G  R    N    G   WL+S+    + EDG I  ++A+  +I++   
Sbjct: 676 FWADVWATISAGGSWRGEVCNKAKDGALYWLDSVLTPFFGEDGSIDRYVALRIDITDRKK 735

Query: 326 GEQKMSEA 333
            E + + +
Sbjct: 736 AEAERNRS 743



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 307 DGEIQGHMAIMRNISEEVIGEQKMSEAL-EKEIALNKMKSQFI-SIT 351
           DGE+ G  A++ ++SE V G QK+  AL E E  L  +  Q + SIT
Sbjct: 589 DGEVLGFYALVHDVSELVEGRQKLDAALRENEALLRTIDEQLLCSIT 635