Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  125 bits (314), Expect = 5e-33
 Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 19/275 (6%)

Query: 305 DEDGEIQ---GHMAIMRNISEEVIG----EQKMSEALEKEIALNKMKSQFISITSHEFKT 357
           DE GE+      MA   NIS++ +     E K+S    KE  L+K+KS+ I++ SHE +T
Sbjct: 369 DEFGELAKAFNKMATQINISDDKLKKHAEELKISYNELKE--LDKLKSELIAVVSHELRT 426

Query: 358 PLSTIKSSIEICNIELQRQLQEHPSEQKFKKHFNRVNNEVDRMNSLLVNLLNLEKINQGV 417
           PL++IK  +E+        + +       KK     ++ + R+  L+ ++L+L KI +G 
Sbjct: 427 PLTSIKGYVELVLDGTMGAINDSQ-----KKCLQVADDNIVRLRRLIESMLDLSKIERGE 481

Query: 418 IQVSSKGKKINSYLRSVLE---DWVDQDSVHFETTLPEDFIHSIDVSLMNQVITNLVENA 474
           +++  +   + S +  V+E       + ++     + ED     D   + QV+TNL+ENA
Sbjct: 482 LEMYREKVNLRSIVCDVIEYLKPLATEKNIKLNKEV-EDIAIEADKDRITQVLTNLIENA 540

Query: 475 LKYGNRDEKVIVKAHHTDRELVVSVRDFGDGIPEKEQEHLFKPFFRASNSSKYDK-GSGL 533
           +K+   +E ++V     D  + + V D G GIP+K+ E +F  F++  +S+K  K GSGL
Sbjct: 541 IKFSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGL 600

Query: 534 GLMITKKFIELQNGTVHFESEEGVGTCFFLTFPLT 568
           GL + K  +E   G++  ESE G G+ F +  P++
Sbjct: 601 GLAVCKSIVEAHKGSIWVESELGKGSTFHIILPIS 635