Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

 Score =  117 bits (294), Expect = 1e-30
 Identities = 126/512 (24%), Positives = 228/512 (44%), Gaps = 81/512 (15%)

Query: 111 DVKNATNKLLCKNVDALNSGLMVSGKSTFGKMTEDVAEAKKYLMIPTLMDNESL----GF 166
           ++ +   KLL KN       L     S + +   D  +A     +  + D  SL     +
Sbjct: 127 EISSYVKKLLEKNTIYAYDILPNEEASKYSEYELDGNDALTIFTVAPIYDGNSLIGTVTY 186

Query: 167 LALVNVEEVHLEKCEGPLRELTVAFALIYLFELRMAGS----GATVNGKSKNELLDMLVK 222
           + ++N ++  +++    ++E+T   A IYL  +R++ +    G    G+  +E +   V 
Sbjct: 187 VDIMNKDDYWVDR----VKEVTGDEASIYLNNVRISTTCIKDGVDFVGELADEDIYETVS 242

Query: 223 HSSDMIGVFDVNWMP---KYLSPSFE---QAFGFT------------RNQLMDPSFFEGF 264
              D+     +N +P   KY SP +    +  G T             N ++   FF  F
Sbjct: 243 KKQDVRSTVTINGVPYLAKY-SPIYNIDGEVIGMTCVGTPKSPFTALLNSVIQKIFFIAF 301

Query: 265 RSKVKD------MEKVVVDGVKRYRFTNLNSAGERIWLESIFDTLYDEDGEIQG-----H 313
            S +        + K +VD +K+ +    NSA      ES     YDE   I        
Sbjct: 302 SSLIIAVFVAVILNKKIVDSIKKLK----NSA------ESFGRGNYDERASIDTGDELEE 351

Query: 314 MAIMRNISEEVIGEQK---------MSEALEKEIALNKMKSQFISITSHEFKTPLSTIKS 364
           +A   N   + IG+           +  + ++   ++ +KS+ +SI SHE +TPL+ I  
Sbjct: 352 LAESFNKMADEIGKSDKKLKSDAHTLKTSFDELKEVDNLKSEILSIVSHELRTPLTAILG 411

Query: 365 SIEICNIELQRQLQEHPSEQKFKKHFNRVNNEVDRMNSLLVNLLNLEKINQGVIQVS--- 421
            +E+   E   +L E     K K+  + ++   DR+  +  N+ +L  ++  ++ +    
Sbjct: 412 YVELLKDETAGKLSE-----KQKEFISVISENSDRLKRITDNMSDLVTVDNKILDIKRDR 466

Query: 422 -SKGKKINSYLRSVLEDWVDQDSVHFETTLPEDFIHSIDV----SLMNQVITNLVENALK 476
            +  K++N  LRS      D  +      L ED + ++D+    S ++QV++NL+ENA+K
Sbjct: 467 INLKKEVNDILRSF-----DYFAESKNIVLLED-VDNLDIKGDKSKIHQVLSNLIENAIK 520

Query: 477 YGNRDEKVIVKAHHTDRELVVSVRDFGDGIPEKEQEHLFKPFFRASNSSKYD-KGSGLGL 535
           +  +  KV V        + + + D G GIP++    +F  F++  +SSK +  GSGLGL
Sbjct: 521 FSKKQTKVTVMGFEDKGNIHLEITDQGPGIPKEHLGKIFDKFYQIDSSSKREVGGSGLGL 580

Query: 536 MITKKFIELQNGTVHFESEEGVGTCFFLTFPL 567
            + KK +E   G++  ES+ G GT   + FPL
Sbjct: 581 AVCKKIVESHGGSIWVESKIGKGTTVHVMFPL 612