Pairwise Alignments

Query, 482 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 505 a.a., reverse transcriptase from Sinorhizobium meliloti 1021

 Score =  159 bits (402), Expect = 2e-43
 Identities = 125/416 (30%), Positives = 203/416 (48%), Gaps = 61/416 (14%)

Query: 54  KELMGKIVSPSNLVAALRQVVSNKG--SAGIDGMSVEELRQWFSSHYH-EFQSQIITGKY 110
           +++ G +     L  A ++V SNKG  +AG+DGM+V  +R      +  + Q+ + +G Y
Sbjct: 32  RDMWGWLTDLRVLRHAWQRVASNKGGRTAGVDGMTVGRIRNRSEHRFLVDLQADLRSGAY 91

Query: 111 RVESVREVQIPKPN--GGVRILGIPTVKDRLVQQAISQVLSLHYDPTFSDRSYGFRPDRG 168
           R    R   IPK    G  R LGIPT++DR+VQ A   +L   ++  F   SYGFRP R 
Sbjct: 92  RPSPARRKLIPKAGKPGQFRPLGIPTIRDRVVQGAAKILLEPIFEAQFWHVSYGFRPGRN 151

Query: 169 AHDAL---RQAGQEVSEGRD---------WIVDIDLEKFFDTVNHDRLMWLLGTRIGDKT 216
            H AL   R+A        D         W+++ D++  FD +NH  L+  +  RIGD+ 
Sbjct: 152 THGALEYIRRAALPQKRDEDTRRNRLPYPWVIEGDIKGCFDNINHHHLLERMRKRIGDRR 211

Query: 217 LLKLIGKFLRAGMLKDGLVSQGVKGMPQGSPLSPLLSNIILDELDKELE----------- 265
           +++L+G FL+AG+L +    +   G PQG  +SPLL+NI L  +++  E           
Sbjct: 212 VVRLVGLFLKAGVLTEDQFLRTDAGTPQGGIISPLLANIALSAIEERYERWTYHRKKTQA 271

Query: 266 ------------------VRG---HRFVRYADDLIVMVK-SEPSAKRVLSSLTAFIEQRM 303
                             + G   +  VRYADD +V+V  S   A    S+L  ++ +  
Sbjct: 272 RRKSNGVAAAASARDSDRIAGRCVYLPVRYADDFVVLVSGSLEEAMAEKSALADYLIKTT 331

Query: 304 LLKVNKSKSKISRPYE-LNFLGHSILIE--------GRLGLSKTSEQRLKAKLKQLTQRN 354
            L +   K+K++   E   FLG    +          R+ + K     L+ K+KQLTQR+
Sbjct: 332 GLTLLPEKTKVTAMTEGFEFLGFRFSVHWDKRYGYGPRVEIPKAKAANLRHKVKQLTQRD 391

Query: 355 R-GISLEQLVKELNPILRGWLNYFKNAQMIGRL-KAIEGWLNRRIRCFRLKQCKRA 408
              +SL + ++ +N I  GW NY++     GR+  A++ ++  R+ C+  K+  +A
Sbjct: 392 SISVSLGEKLRGVNAITSGWANYYRYCVGAGRVFVALDWYIGLRLYCWLHKKRPKA 447