Pairwise Alignments

Query, 482 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

 Score =  293 bits (751), Expect = 6e-84
 Identities = 167/406 (41%), Positives = 241/406 (59%), Gaps = 8/406 (1%)

Query: 56  LMGKIVSPSNLVAALRQVVSNKGSAGIDGMSVEELRQWFSSHYHEFQSQIITGKYRVESV 115
           L+   ++  NL  A ++V +NKG+AG DG+S+E       + + + + +++ G YR   V
Sbjct: 45  LLEAALARENLQRAWKRVKANKGAAGADGLSIEATAAHLRTSWPDIRERVLAGTYRPMPV 104

Query: 116 REVQIPKPNGGVRILGIPTVKDRLVQQAISQVLSLHYDPTFSDRSYGFRPDRGAHDALRQ 175
           R V IPKP+GG R LGIPTV DRL+QQA+ QVL    DP FS+ S+GFRP R AHDA+ +
Sbjct: 105 RRVTIPKPDGGERELGIPTVTDRLIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHDAVLE 164

Query: 176 AGQEVSEGRDWIVDIDLEKFFDTVNHDRLMWLLGTRIGDKTLLKLIGKFLRAGMLKDGLV 235
           A   V  GR  +VD+DLEKFFD VNHD L+  L  RI D+ +++LI  +L +G++  G+V
Sbjct: 165 AQSYVQSGRRIVVDVDLEKFFDRVNHDILIDRLSKRISDRRVIRLIRAYLNSGIMDHGVV 224

Query: 236 SQGVKGMPQGSPLSPLLSNIILDELDKELEVRGHRFVRYADDLIVMVKSEPSAKRVLSSL 295
            + V G PQG PLSPLL+N++LDE+DKELE RGH FVRYADD  V V S  + +RV++ L
Sbjct: 225 QERVMGTPQGGPLSPLLANVLLDEVDKELERRGHCFVRYADDCNVYVGSRKAGERVMALL 284

Query: 296 TAFIEQRMLLKVNKSKSKISRPYELNFLGHSILIEGRLGLSKTSE-----QRLKAKLKQL 350
              +  R+ L +N+ KS ++  +   FLG S    GR G  K           K +++QL
Sbjct: 285 RR-LYGRLHLTINEGKSAVTSVFGRKFLGFSFW-RGRDGAVKRRVADKPLNAFKRRVRQL 342

Query: 351 TQRNRGISLEQLVKELNPILRGWLNYFKNAQMIGRLKAIEGWLNRRIRCFRLKQCKRAFT 410
           T+R+ G S+ ++ + L   + GW  YF+ AQ     K +E W+  R+R  +LK  KR  T
Sbjct: 343 TRRSGGRSMAEVAERLRVYVLGWKAYFRLAQTPRLFKELEEWMRHRVRAIQLKHWKRGKT 402

Query: 411 MAKLLHRLGVPWNRSWATAGSSKGWYRLSVTPAAHEAMNLKWFGTI 456
             K L   G     +   A +S+ W+R S     +  + L+W   +
Sbjct: 403 TYKALLAKGAKPEAARQIAVNSRRWWRNS-GMLLNSVLTLRWMDAL 447