Pairwise Alignments

Query, 593 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 568 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  112 bits (281), Expect = 3e-29
 Identities = 160/592 (27%), Positives = 237/592 (40%), Gaps = 75/592 (12%)

Query: 19  SCVESTLDKTPELAFSEENAFANFQVTQTYAFGFYSIFPGYNLSVPNSDWDGDLMMHNNT 78
           SC +  LD+ P  + ++ + +   +  +  A   YS     N     +  D  +   N+ 
Sbjct: 34  SCKKGFLDREPLDSVTDISFWKTEEQLKLAANACYSNLRNNNTIAMENMGDNTIYPPNSE 93

Query: 79  NQGSAWIWGRQTIPTTSGIWD--FSFVRRVNIMLQNLD-ASNMTEAEKNHWRAIGYFFRA 135
            Q  +      T  T +  W   ++ +RR N  L+N   A+N++      +     F RA
Sbjct: 94  YQAISAGNYDFTSGTLNSEWVNLYAAIRRCNHFLENYTKATNISATALAQYAGEVRFLRA 153

Query: 136 YDYYEKIAAYGDVPWIDRVLTDDDELLQAGRTPRAEVAQNILDDLLFAEANIMEPGTNGI 195
           + Y   I  +GDVP + + L   DE +   R  RAEV + +  DL  A A        G+
Sbjct: 154 FMYTYLIFLFGDVPLLSKTLDIGDEEVFGPRNKRAEVLEFVFADLDAAAA--------GL 205

Query: 196 PANTISSDVVRALISRFGLFEGTWRKYHGLEGGEPFLRASATAGETLIENNPSLHSN--- 252
           P    ++D+ R  I++   F   W+    L   E +  A A A   +  N   L++    
Sbjct: 206 PTAYTAADLGR--ITKGAAF--AWKARVALFF-EKWSIAEAAAKSVMDLNVYQLYTAGGT 260

Query: 253 ---YNELFNSADL---GGVPGILLYKSYENGVFTHVLTSRH---RNSAGNWDITKRGADS 303
              YN+LF        G     +L +    GV  H  TSR     +    +  TK   D+
Sbjct: 261 AKCYNDLFTYKGKLAGGANKETILARPNVAGVSVHN-TSREIQVPDQTSRYSPTKSLVDA 319

Query: 304 YLMKDGETRWNSELFETDRDPYAE-FRNRDLRMLFTITPPFRVKPVSGDRLSWEYSDDPK 362
           YL  DG     S L+      YA+ F+NRD RM  TI  P           +W   DD  
Sbjct: 320 YLCIDGLPIDKSPLYS--ESTYADIFKNRDPRMNQTILTPGG---------AWGGQDDG- 367

Query: 363 DKEYIDFMEERMDPSQKQLPSRNHAGYILRVSPHFRDFNEGDPYNVSRTGYKLFKYYN-R 421
                       D      P  N        +P +    +G    ++ TG+   KY    
Sbjct: 368 ------------DADATTNPIFN--------TPKWNADKKGC---ITGTGFYFSKYVEVA 404

Query: 422 LHDIQNNDFNDAPVFRMGEVLVNFAEAKWELGEFDQSVADMTINKLRERGEVAAMTVLNV 481
                + D ND    R  EVL+ FAEA+ E G   Q+  D TINKLR+R  +  M +  +
Sbjct: 405 AVGTVSQDSNDIHHIRYAEVLLTFAEARLEQGTLTQTDIDNTINKLRDRVGMKRMVITEL 464

Query: 482 GSDFDPTRDPEIDPVLWEIRRERGVELMAEGFRFNDLRRWKKMDYTDEPKLGRWIVGAEV 541
            +     R         EIRRER VEL  EG R+ D+ RWK+ D   +   G      E 
Sbjct: 465 AAAGLDLRT--------EIRRERRVELALEGQRYYDILRWKQGDLLAQDVKGMKKSLVES 516

Query: 542 NNRIPIQGGAEEGYIQFFPGTPPAW-EDYQYLYPVPSQEIALNPNLEQNPGW 592
            N+  +   A +    F   T   +     YL+P+P  ++  NP L QNPGW
Sbjct: 517 FNQQYVATIATDANGYFVVNTGRKFVAPKNYLWPIPITQLQRNPVLGQNPGW 568