Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 186 a.a., RNA polymerase sigma factor, sigma-70 family from Pseudomonas stutzeri RCH2

 Score = 62.8 bits (151), Expect = 4e-15
 Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 22/169 (13%)

Query: 19  GSEEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKIWKNRQQLDSTLSFNAYLI 78
           G  +AF  L R +  +++H  R++    ++A  + QE FI+ ++   +         +L+
Sbjct: 15  GDRQAFGALVRAHQARVFHFIRRLLGSTDEAADLTQETFIRAYQALPRWRPEARLQTWLL 74

Query: 79  AIVRSI---VIRQLQRKANLTAYKKYS--------LQRMEDWDNQTEDQVIFSEMMNVSS 127
            I R+    ++RQ QR   L A ++          L+R++            +  + +  
Sbjct: 75  QIARNAALDLLRQRQRHVVLAADEQAEPIDPAPSPLRRLQS-----------ARDLEMLE 123

Query: 128 KVMDTLPPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQVFRANKAM 176
           +++  LP  Q+ + L+R +E +S DE+A  LQ++  TVK+++ RA +A+
Sbjct: 124 RLLARLPHEQREILLLREVEGLSYDELAATLQLNAGTVKSRLARAREAL 172