Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 171 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 75.1 bits (183), Expect = 7e-19
 Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 3/156 (1%)

Query: 27  LFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKIWKNRQQLDSTLSFNAYLIAIVRSIVI 86
           ++R Y + ++ I+ K +     A+ I QE+FI +W+NR  ++ + S  AYL   V+  VI
Sbjct: 4   IYRSYWEDVFDIALKKTGDEAVAQDITQEIFISLWENRAAINLSGSLGAYLHGAVKYKVI 63

Query: 87  RQLQRKANLTAYKKYSLQRMEDWDNQT--EDQVIFSEMMNVSSKVMDTLPPGQKRVFLMR 144
               R  ++ A  + +L  + D  +    +DQ+I  E+       +  LP   + VF M 
Sbjct: 64  NYF-RSGSVKAQHQTALITLMDEQHTAAADDQLILKELHLEVDAAIALLPEKMQLVFSMS 122

Query: 145 NLEDMSLDEIAEKLQVSKKTVKNQVFRANKAMRLSL 180
             ++ S+ EIA +L VS +TVKNQ+  A K ++ SL
Sbjct: 123 RKQEKSIKEIASELDVSVQTVKNQISAALKLLKKSL 158