Pairwise Alignments

Query, 342 a.a., Heme/copper-type cytochrome/quinol oxidases, subunit 2 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 315 a.a., cytochrome c oxidase subunit II from Synechococcus elongatus PCC 7942

 Score =  102 bits (255), Expect = 1e-26
 Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 38/295 (12%)

Query: 59  LFFWYSFKEFHNYHLPIASEHGVVTDNLFWVTMAITGVVFIITHILLFWFSYRYQYKENA 118
           L  WY   + H      A+    + D LF   M I   +F++   L+F   +R++ K N 
Sbjct: 19  LSLWYG--QNHGLLPVAAATDAPLVDGLFNTMMTIATGLFLLVQGLIFVILWRFRRKPND 76

Query: 119 KASYFP--ENNKLEVIWTAVPALVLTVLIVYGWKSWSDIT-------------APAPENA 163
                P   N  LE++WT +P +++  L VY +  ++ +              A   ++A
Sbjct: 77  VTDAAPIHGNLALEILWTGIPVVIVLGLSVYSFSVYTTMGGLSVGHGGGHMAHAQPRDSA 136

Query: 164 HVVEVMGYQFAWEFRYPGKDQQLGKYDYRLINPS-NSRGIDFTDKNALDDFPAQKVV--- 219
              E+           P     LG     L + + N +G+ F     + ++P+  ++   
Sbjct: 137 IAAELSSDSLQDSKSTPRVSAGLGAPTEALPDVTVNVKGLQFA---WIFNYPSHNLIAGE 193

Query: 220 --IPKGEPVLFKIRSRDVLHSVFAPHMRLKMDAVPGMPTRFWFVPTKTTAEMRAELGDEE 277
             +P G+ V  +I ++DV+H+ + P  RLK DA+PG  TR  F PT        +LG   
Sbjct: 194 LHLPLGKSVQLEIEAQDVIHAFWVPQFRLKQDAIPGERTRLQFTPT--------QLG--- 242

Query: 278 FVYEIACTEVCGGGHFSMRREIEVVEPEEYQKWFAEQQTFIEMDPSLVADAPAEI 332
             Y I C E+CG  H +MR ++ V  PE+Y +W   Q T   + PS +  A A +
Sbjct: 243 -TYPIVCAELCGSYHGAMRSQVIVETPEDYDRWIQSQTTTAAVVPSRLETATAAL 296