Pairwise Alignments

Query, 1428 a.a., DNA-directed DNA polymerase III (polc) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1170 a.a., DNA polymerase III subunit alpha from Phaeobacter inhibens DSM 17395

 Score =  662 bits (1707), Expect = 0.0
 Identities = 435/1223 (35%), Positives = 656/1223 (53%), Gaps = 104/1223 (8%)

Query: 245  FSHLHVHTQYSILQATSEIPAMVARAKEFNMPAIAMTDHGNMMAAFHFVKAAMDNDIKPV 304
            F HL  HT+YS+L+    +  +    K+  MPAIA+TD  N+ AA  F  AA    ++P+
Sbjct: 7    FIHLRTHTEYSLLEGALRLKKLPDLCKKHEMPAIAVTDSNNLFAALEFSVAASGAGVQPI 66

Query: 305  VGCEFNICRDHQNKSQKDDG-FQAVLLAKNKTGYHNLAKLASFAYTQGFYYVPRIDKELL 363
            +GC+ ++        ++       VLLA+++TGY +L KL S  Y +    +  +  E L
Sbjct: 67   MGCQVDLRFTEPTPGERPKPPAPLVLLAQSETGYEHLMKLNSCLYMREGSELAHVTLEEL 126

Query: 364  VQYKGDIIATTGGLWGEVPFLILNVGETQAEEAFVW-WKEQFGEDFYVELNRH----GIP 418
              +  D+I  +GG  G V  L L +G+  A EA +   K  F +  YVEL RH    G P
Sbjct: 127  AAHSEDVICLSGGPDGPVGRL-LQMGQRPAAEALMQRLKAMFPDRLYVELQRHPGEHGQP 185

Query: 419  EEEKVNEV-LLRFAQKYDVKYFAANNTYYNTKNDAKAHDILLCVKDGEKVDK--PKRYIG 475
            E E+  E   +  A   D+   A N+ Y+      +AHD ++C+ +G  VD+  P+R + 
Sbjct: 186  EAEQATERGHVEMAYAMDLPLVATNDVYFPNTEMYEAHDAMICIAEGAYVDQAEPRRRL- 244

Query: 476  KKGREFRYGFPNEEFYIKTPEEMKKLFADLPEAIECTNEIIEKVEPYKLAREVLLPKFNI 535
                         + Y K+ EEM  LFADLPEAIE T EI ++       R+ +LPKF  
Sbjct: 245  -----------TAQHYFKSQEEMVALFADLPEAIENTVEIAKRCAFMAYRRDPILPKF-- 291

Query: 536  PEQFQDPQDDEDGGKRGENAYLRHLTYEGAKRRYPEI-----TEEIRERLDFELSIIANT 590
                    DDE        A LR +  EG ++R   I      E+ +ERLDFEL II   
Sbjct: 292  -------ADDEV-------AELRRIANEGLQQRLAVIPHAVSVEDYQERLDFELGIIEGM 337

Query: 591  GYPGYFLIVQDFTTAAREMGVSVGPGRGSAAGSAVAYCIGITNVDPVAYDLLFERFLNPD 650
            G+PGYFLIV DF   A++  + VGPGRGS AGS VAY + IT++DP+ Y LLFERFLNP+
Sbjct: 338  GFPGYFLIVADFIQWAKDHDIPVGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPE 397

Query: 651  RVSLPDIDIDFDDHGRQKVIDYVIEKYGANQVAQIITYGTMAAKSAIRDTARALDLPLSD 710
            RVS+PD DIDF    R++VI YV EKYG ++V QIIT+G + +K+A+RD  R L +P   
Sbjct: 398  RVSMPDFDIDFCMDRREEVIKYVQEKYGRDKVGQIITFGALLSKAAVRDMGRVLQMPYGQ 457

Query: 711  ADRLAKLVP--DIKLKALFGLANDRGKLAEKLKNNSENIDKAYELINISKGNDDLSKTIN 768
             DRL+KL+P   +K  ++     +  +L E+ +N                  + + + + 
Sbjct: 458  VDRLSKLIPVEGVKPMSIVDSLREEPRLREEAENE-----------------EVVDRLLK 500

Query: 769  QAKILEGSVRNTGIHACGVIITPDDITNFVPVALAKDSDMYCTQFDNSVVENAGLLKMDF 828
                +EG +R+ G HA GV+I    +   VP+     SDM  TQF+   VE AGL+K DF
Sbjct: 501  YGMQVEGLLRSAGTHAAGVVIGDRPLDALVPLYRDPRSDMPATQFNMKWVEQAGLVKFDF 560

Query: 829  LGLKTLTLIKDAVRIV----KERH-------------GIELDPENFPIDDKETYELFQRG 871
            LGLKTLT+I++A+ ++    ++ H             G E      P+DD  TY+L+ R 
Sbjct: 561  LGLKTLTVIQNAMDLIFQSGRDLHVAADGTQLYDPPEGAENQINAIPLDDTVTYDLYSRA 620

Query: 872  ETVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIKRKHGLEPIAYDL 931
            +TV +FQ ES GM   ++ +KPT   D++A+ ALYRPGP+E IP + + K+GL  I    
Sbjct: 621  KTVAVFQVESTGMMDALKRMKPTCIEDIVALVALYRPGPMENIPVYCEVKNGLRKIQSVH 680

Query: 932  DDMEEYLQETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKLRDVLDKMKPKFVNQ 991
              ++  L+ET GI VYQEQVM ++Q +A +T G AD+LR+AMGKK+++ +D  +PKF   
Sbjct: 681  PLIDHILEETQGIIVYQEQVMQIAQVMANYTLGGADLLRRAMGKKIKEAMDAERPKFEKG 740

Query: 992  AAEKGHDKAKLEKIWKDWEAFASYAFNKSHSTCYAWVAYQTAYLKAHYPAEYMASVLSNN 1051
            AAE G    K  +++   E FA+Y FNKSH+  YA V+YQT +LKA++P E+MA V++ +
Sbjct: 741  AAENGVPAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQTGWLKANHPVEFMAGVMNCD 800

Query: 1052 MNDITQVTFFMEECKR-MGIEVLGPDVNESKDGFTVNQEGQIRFGLAAIKGAGGAAVHSV 1110
            ++   ++  + EE K+ + +  + P VN S+  F V  +G++ + L A+K  G  A+  V
Sbjct: 801  IHLTDKLAIYFEEVKKGLSLPYVPPCVNRSEATFNV-VKGELVYALGALKNVGVEAMRLV 859

Query: 1111 IEERAENG---PYKSIFDFTQRVNLRSVNKKTLESLAMAGGFDCFPDHHRRQYLEAPEND 1167
               R E+G   P+ ++FDF +RV+L+ V K+ LE LA AGGFD    + RR +       
Sbjct: 860  TAARRESGEDKPFATLFDFARRVDLKKVGKRPLEMLARAGGFDQLDPNRRRVF------- 912

Query: 1168 ATLIEKAVKYAQKKAQEAESSQVSLFGGGSGMEVPMPSITPIEPFSQLQQLNIEKEVVGL 1227
               +   V Y+     +  SSQVSLF G +G ++P P +     +   ++L+ E + +G 
Sbjct: 913  -DSLGALVDYSSAVHDQRNSSQVSLF-GEAGEDLPEPRLPGTPDWLPAERLSEEFKAIGF 970

Query: 1228 YISGHPLDQFKVEFDSFTNTPLSEFANTEALKTKGEIKAAGVVTSFAHRTTKNGNPFGTL 1287
            Y+SGHPLD +           L E    +A +     K AGVV     R +  GN F   
Sbjct: 971  YLSGHPLDDYMPALKRKDVMTLDE-VTAKAERGPFMAKMAGVVAGRQERKSARGNRFAFA 1029

Query: 1288 TLEDYNGGHTFFLFGEDYIKYKEYFMTGWFLYVTGSVQGKRWNPDELEFKVGNIMLLN-E 1346
             L D +GG+   LF E   K +E+  TG  + +T          D+L+  V ++  ++  
Sbjct: 1030 QLSDTSGGYEVTLFSEVLEKSREFLETGAKVVITAEA---TMESDQLKLLVRSVGPVDAA 1086

Query: 1347 VRGKMVKGLRLNISLDDLTLDLMERLE----AITSKYKGEAKLYINVTDVKERIAVDLRS 1402
            +       LR+ IS       + + LE    A  +  +GE  +Y+    +   + +DL  
Sbjct: 1087 IADAGRSSLRVYISQASAVATVAQVLEDAKSAARNASRGEVYMYLQDPGLPGDVEMDL-G 1145

Query: 1403 TKFLIDPS-QDMIKALEDIPEVQ 1424
              F I+P  +  +K+L+ + +V+
Sbjct: 1146 QPFPINPQIKGALKSLDGVMDVE 1168