Pairwise Alignments

Query, 203 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 210 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.0 bits (123), Expect = 8e-12
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 18/154 (11%)

Query: 14  DNMVFAYFLGMCSFLAVSKKVSTALGLGAAVIFVLTITVPLNWLLNEFVLKEGALSFLGE 73
           +N +    LG+CS LAV+ K+ TAL +  A+  V   +     ++   +           
Sbjct: 18  NNPIALQVLGVCSALAVTSKLETALVMALALTAVTAFSNLFISMIRNHIPSS-------- 69

Query: 74  SFATIDLTFLRFIMFIAIIAAMVQLVEMVVEKFAPALYGALGIFLPLIAVNCAILGGSLF 133
                    +R I+ + IIA++V +V+ +++ +A  +   L +F+ LI  NC ++G +  
Sbjct: 70  ---------VRIIVQMTIIASLVIVVDQLLQAYAYQISKQLSVFVGLIITNCIVMGRAEA 120

Query: 134 MAQRDYTLAEAGVYGFGSGTGFFLAIVALAAIRE 167
            A +   +  + + G G+G G+   ++A+  +RE
Sbjct: 121 YAMKTPPMM-SFMDGIGNGLGYGAILLAVGFVRE 153