Pairwise Alignments

Query, 227 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (546), Expect = 8e-61
 Identities = 106/203 (52%), Positives = 150/203 (73%), Gaps = 8/203 (3%)

Query: 20  SKRRKKLISDPLVDDNPITIQVLGICSALAVTTQMKPTLVMALSVIFVIVMSNLTISIMR 79
           +K  KK +  P++D+NPI +QVLG+CSALAVTT+++   VM L+V+FV  +SN  +S++R
Sbjct: 4   AKELKKSVLAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIR 63

Query: 80  NTIPTRVRIIVQLAVVATLVTLVNEILKAFAYDMYKELSVFVGLIITNCIVMGRLEAFAL 139
           N IP  VRIIVQ+A++A+LV +V++ILKA+ YD+ K+LSVFVGLIITNCIVMGR EAFA+
Sbjct: 64  NHIPNSVRIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAM 123

Query: 140 GNKPYDSVLDGFGSALGYSWIILTVAFFRELWGSGSVFGIPVFDTVSS--WFGEDFSLAT 197
            ++P  S +DG G+ LGY ++++TV FFREL GSG +FG+ V   +S+  W+        
Sbjct: 124 KSEPIPSFIDGIGNGLGYGFVLMTVGFFRELLGSGKLFGLEVLPLISNGGWY------QP 177

Query: 198 NGLMVSPVGAFIILGLIIWVQRT 220
           NGLM+    AF ++G +IW  RT
Sbjct: 178 NGLMLLAPSAFFLIGFMIWAIRT 200