Pairwise Alignments

Query, 227 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 206 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  184 bits (466), Expect = 1e-51
 Identities = 93/195 (47%), Positives = 137/195 (70%), Gaps = 8/195 (4%)

Query: 24  KKLISDPLVDDNPITIQVLGICSALAVTTQMKPTLVMALSVIFVIVMSNLTISIMRNTIP 83
           + +++ P+  +NP+ +QVLG+CSALAV+  M+  +VM L+V FV+V SNL IS +RN IP
Sbjct: 8   RDMLAGPVFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFIP 67

Query: 84  TRVRIIVQLAVVATLVTLVNEILKAFAYDMYKELSVFVGLIITNCIVMGRLEAFALGNKP 143
             VRII Q+ V+A+LV +V+ +L+  AY++ K+LSVFVGLIITNCI+MGR EAFA+   P
Sbjct: 68  NSVRIIAQMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEAFAMKYPP 127

Query: 144 YDSVLDGFGSALGYSWIILTVAFFRELWGSGSVFGIPVFDTVSS--WFGEDFSLATNGLM 201
           + +V+D  G+A GY  ++++VAF REL G+G++FG  V  TV +  W+        N + 
Sbjct: 128 HLAVVDAVGNAAGYGLVLISVAFVRELLGTGNLFGHSVLTTVENGGWY------LPNEMF 181

Query: 202 VSPVGAFIILGLIIW 216
             P  AF ++GL+IW
Sbjct: 182 KLPPSAFFLIGLLIW 196