Pairwise Alignments

Query, 454 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 456 a.a., NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  248 bits (632), Expect = 4e-70
 Identities = 155/453 (34%), Positives = 240/453 (52%), Gaps = 7/453 (1%)

Query: 2   SKLVKLKKGFDIKLEGKAEKKTEAFPPAQTFAIKPTDFVGMQRPKVTVKEGDTVKAGTPI 61
           ++++ +KKG D+ + G+  +  E        A+   ++VG+ +P + V+ GD VK G P+
Sbjct: 6   NQVITIKKGLDLPISGEPRQIIEPGNRPSQVALLGEEYVGL-KPTMLVEVGDKVKKGQPL 64

Query: 62  LFDKKLESVLYAAPVSGEIVEIKRGEKRKLLEIKIMADKEISYEEFSKFSESDLKSLTKE 121
             DKK + V + AP SGEIV I RGE+R L  + I  +   + E+      +DL+SL+ +
Sbjct: 65  FEDKKTKGVFFTAPASGEIVAINRGERRVLQSVVIRCNGLDADEQIRFDIHADLQSLSAQ 124

Query: 122 QATDALLKGGVWPQIIQRPFGIVANPEDEPKAIFISGFDSHPLAPDYGVLLKGQEKYFQA 181
                L+  G+W  +  RPF  V   + +P  IF++  D++PLA D  +++  Q   F+A
Sbjct: 125 VVQAQLVNSGLWTALRTRPFSRVPALDSKPAGIFVTAMDTNPLAADPRLIIAEQSDAFKA 184

Query: 182 GLNTLKKLTSGKVHLNLDQDSEVSPVYAGAQGVEVNKFSGPHPAGNVGVQIHHLDPINKG 241
           GL  L  LT GKV+  L QD   + V A    VEV +F+G HPAG  G  IH   P++  
Sbjct: 185 GLAVLSHLTDGKVY--LCQDKGEALVGADLPKVEVRRFTGVHPAGLAGTHIHFTLPVSIE 242

Query: 242 EVAWTINPYGVVQIGKLLLEGIYDASKVVAITGSEAKKAVYAKTYQGACVDKLVAGNTKS 301
              W I    V+  GKL   G     +VVA+ G         +T  GA +  LVA   KS
Sbjct: 243 RQVWHIGYQDVIAYGKLFQTGELYTDRVVALGGPSVLNPRLLRTQLGAELSALVADEVKS 302

Query: 302 DHFRVVSGNVLTGERIN--HDGYLGYYDHQITLLPEGDYYEFMGWAKPTSSKLSFHRALG 359
            + RVVSG+VL+G      HD +LG + +QI++L E   ++ + W +  S K S  RA+ 
Sbjct: 303 GNNRVVSGSVLSGHTAQGVHD-FLGRFHNQISVLAEDAQHQVLPWVRGGSDKFSITRAVT 361

Query: 360 LLSFLSPNKEYVLDTNTRGEERAFVQTGVFEQVTPMDIFPIYLLKAIMAEDFDEMEELGI 419
              F    K +   T+  G +RA +  G  ++V P+DI P  L++ ++  D DE + LG 
Sbjct: 362 SRLF-GLTKSFEFTTHQGGSQRAMMAFGQLDRVMPLDILPTLLVRDLVVRDTDEAQALGA 420

Query: 420 YEIIEEDLALCEFIDVSKHPVQDIVRKGIELIQ 452
            E+ EEDLALC F+   K+     +R  +++I+
Sbjct: 421 LELDEEDLALCTFVCPGKYDFGKELRACLDVIE 453